Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.87■□□□□ 0.93
ChkaO54804 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.87■□□□□ 0.93
ChkaO54804 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ChkaO54804 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChkaO54804 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChkaO54804 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChkaO54804 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChkaO54804 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.86■□□□□ 0.93
ChkaO54804 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.86■□□□□ 0.93
ChkaO54804 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ChkaO54804 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChkaO54804 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChkaO54804 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChkaO54804 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
ChkaO54804 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ChkaO54804 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.85■□□□□ 0.93
ChkaO54804 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.85■□□□□ 0.93
ChkaO54804 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.85■□□□□ 0.93
ChkaO54804 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkaO54804 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkaO54804 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.84■□□□□ 0.93
ChkaO54804 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkaO54804 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.84■□□□□ 0.93
ChkaO54804 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.84■□□□□ 0.93
ChkaO54804 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ChkaO54804 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ChkaO54804 Gm45444-201ENSMUST00000211394 898 ntBASIC20.84■□□□□ 0.93
ChkaO54804 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkaO54804 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkaO54804 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkaO54804 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkaO54804 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ChkaO54804 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ChkaO54804 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
ChkaO54804 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ChkaO54804 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ChkaO54804 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.83■□□□□ 0.93
ChkaO54804 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.83■□□□□ 0.93
ChkaO54804 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
ChkaO54804 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ChkaO54804 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ChkaO54804 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkaO54804 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkaO54804 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkaO54804 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ChkaO54804 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ChkaO54804 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkaO54804 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
ChkaO54804 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkaO54804 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ChkaO54804 Gm13238-201ENSMUST00000117655 780 ntBASIC20.82■□□□□ 0.92
ChkaO54804 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkaO54804 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkaO54804 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkaO54804 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ChkaO54804 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkaO54804 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChkaO54804 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChkaO54804 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChkaO54804 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChkaO54804 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ChkaO54804 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ChkaO54804 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChkaO54804 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ChkaO54804 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.81■□□□□ 0.92
ChkaO54804 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ChkaO54804 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChkaO54804 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChkaO54804 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChkaO54804 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChkaO54804 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
ChkaO54804 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ChkaO54804 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ChkaO54804 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ChkaO54804 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ChkaO54804 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
ChkaO54804 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ChkaO54804 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ChkaO54804 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ChkaO54804 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ChkaO54804 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ChkaO54804 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
ChkaO54804 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ChkaO54804 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ChkaO54804 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.79■□□□□ 0.92
ChkaO54804 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ChkaO54804 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ChkaO54804 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms