Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM38O00635 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM38O00635 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.05■■□□□ 1.28
TRIM38O00635 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM38O00635 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM38O00635 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM38O00635 MIR3621-201ENST00000580529 85 ntBASIC23.05■■□□□ 1.28
TRIM38O00635 AL139246.5-201ENST00000606645 996 ntBASIC23.05■■□□□ 1.28
TRIM38O00635 MIR6724-1-201ENST00000616420 92 ntBASIC23.05■■□□□ 1.28
TRIM38O00635 MIR6724-2-201ENST00000616483 92 ntBASIC23.05■■□□□ 1.28
TRIM38O00635 MIR6724-4-201ENST00000617390 92 ntBASIC23.05■■□□□ 1.28
TRIM38O00635 MIR6724-3-201ENST00000622482 92 ntBASIC23.05■■□□□ 1.28
TRIM38O00635 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM38O00635 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
TRIM38O00635 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM38O00635 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIM38O00635 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM38O00635 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
TRIM38O00635 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM38O00635 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM38O00635 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM38O00635 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
TRIM38O00635 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TRIM38O00635 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM38O00635 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM38O00635 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM38O00635 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM38O00635 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM38O00635 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM38O00635 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TRIM38O00635 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM38O00635 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM38O00635 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM38O00635 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM38O00635 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
TRIM38O00635 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.02■■□□□ 1.28
TRIM38O00635 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM38O00635 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.02■■□□□ 1.28
TRIM38O00635 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM38O00635 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM38O00635 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
TRIM38O00635 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.01■■□□□ 1.27
TRIM38O00635 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
TRIM38O00635 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM38O00635 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM38O00635 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM38O00635 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM38O00635 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM38O00635 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23■■□□□ 1.27
TRIM38O00635 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM38O00635 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TRIM38O00635 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23■■□□□ 1.27
TRIM38O00635 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM38O00635 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23■■□□□ 1.27
TRIM38O00635 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23■■□□□ 1.27
TRIM38O00635 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23■■□□□ 1.27
TRIM38O00635 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23■■□□□ 1.27
TRIM38O00635 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23■■□□□ 1.27
TRIM38O00635 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 AF131216.4-201ENST00000638924 1588 ntBASIC22.99■■□□□ 1.27
TRIM38O00635 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.99■■□□□ 1.27
TRIM38O00635 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.99■■□□□ 1.27
TRIM38O00635 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.99■■□□□ 1.27
TRIM38O00635 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.99■■□□□ 1.27
TRIM38O00635 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 AL356740.2-201ENST00000601559 647 ntBASIC22.99■■□□□ 1.27
TRIM38O00635 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM38O00635 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM38O00635 AC133561.1-201ENST00000568600 2415 ntBASIC22.98■■□□□ 1.27
TRIM38O00635 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM38O00635 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
TRIM38O00635 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM38O00635 MIR4466-201ENST00000606121 54 ntBASIC22.98■■□□□ 1.27
TRIM38O00635 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
TRIM38O00635 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM38O00635 AC096887.2-201ENST00000623443 1957 ntBASIC22.98■■□□□ 1.27
TRIM38O00635 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM38O00635 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
TRIM38O00635 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.97■■□□□ 1.27
TRIM38O00635 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.97■■□□□ 1.27
TRIM38O00635 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.97■■□□□ 1.27
TRIM38O00635 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM38O00635 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.97■■□□□ 1.27
TRIM38O00635 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM38O00635 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
TRIM38O00635 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIM38O00635 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.96■■□□□ 1.27
TRIM38O00635 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.96■■□□□ 1.27
TRIM38O00635 AC110285.6-201ENST00000617652 491 ntBASIC22.96■■□□□ 1.27
TRIM38O00635 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.96■■□□□ 1.27
TRIM38O00635 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM38O00635 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms