Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Gm21788J3QNH3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm21788J3QNH3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm21788J3QNH3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm21788J3QNH3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm21788J3QNH3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm21788J3QNH3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm21788J3QNH3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm21788J3QNH3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.45■□□□□ 0.38
Gm21788J3QNH3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.45■□□□□ 0.38
Gm21788J3QNH3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Gm21788J3QNH3 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.45■□□□□ 0.38
Gm21788J3QNH3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Gm21788J3QNH3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm21788J3QNH3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm21788J3QNH3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm21788J3QNH3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Gm21788J3QNH3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm21788J3QNH3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm21788J3QNH3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.44■□□□□ 0.38
Gm21788J3QNH3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm21788J3QNH3 Gm45444-201ENSMUST00000211394 898 ntBASIC17.44■□□□□ 0.38
Gm21788J3QNH3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm21788J3QNH3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm21788J3QNH3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm21788J3QNH3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Gm21788J3QNH3 Cap2-205ENSMUST00000225824 1634 ntBASIC17.43■□□□□ 0.38
Gm21788J3QNH3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Gm21788J3QNH3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm21788J3QNH3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm21788J3QNH3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.43■□□□□ 0.38
Gm21788J3QNH3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.43■□□□□ 0.38
Gm21788J3QNH3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.43■□□□□ 0.38
Gm21788J3QNH3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm21788J3QNH3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Gm21788J3QNH3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm21788J3QNH3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm21788J3QNH3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm21788J3QNH3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Gm21788J3QNH3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm21788J3QNH3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm21788J3QNH3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm21788J3QNH3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Gm21788J3QNH3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm21788J3QNH3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm21788J3QNH3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Gm21788J3QNH3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm21788J3QNH3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm21788J3QNH3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm21788J3QNH3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm21788J3QNH3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm21788J3QNH3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm21788J3QNH3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm21788J3QNH3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm21788J3QNH3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm21788J3QNH3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm21788J3QNH3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm21788J3QNH3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm21788J3QNH3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm21788J3QNH3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm21788J3QNH3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm21788J3QNH3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm21788J3QNH3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm21788J3QNH3 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.37■□□□□ 0.37
Gm21788J3QNH3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm21788J3QNH3 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.37■□□□□ 0.37
Gm21788J3QNH3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gm21788J3QNH3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm21788J3QNH3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Gm21788J3QNH3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm21788J3QNH3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm21788J3QNH3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm21788J3QNH3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Gm21788J3QNH3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm21788J3QNH3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm21788J3QNH3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm21788J3QNH3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm21788J3QNH3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 157.9 ms