Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC29.77■■■□□ 2.36
Hfm1D3Z4R1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
Hfm1D3Z4R1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Hfm1D3Z4R1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
Hfm1D3Z4R1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Hfm1D3Z4R1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Hfm1D3Z4R1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Hfm1D3Z4R1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Hfm1D3Z4R1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC29.76■■■□□ 2.35
Hfm1D3Z4R1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Hfm1D3Z4R1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
Hfm1D3Z4R1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
Hfm1D3Z4R1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Hfm1D3Z4R1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Hfm1D3Z4R1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC29.74■■■□□ 2.35
Hfm1D3Z4R1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Hfm1D3Z4R1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Hfm1D3Z4R1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC29.73■■■□□ 2.35
Hfm1D3Z4R1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Hfm1D3Z4R1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Hfm1D3Z4R1 Gm40848-201ENSMUST00000221998 324 ntBASIC29.73■■■□□ 2.35
Hfm1D3Z4R1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Hfm1D3Z4R1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Hfm1D3Z4R1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
Hfm1D3Z4R1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Hfm1D3Z4R1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
Hfm1D3Z4R1 Gm42642-201ENSMUST00000200683 355 ntBASIC29.72■■■□□ 2.35
Hfm1D3Z4R1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC29.72■■■□□ 2.35
Hfm1D3Z4R1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Hfm1D3Z4R1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Hfm1D3Z4R1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Hfm1D3Z4R1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Hfm1D3Z4R1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Hfm1D3Z4R1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Hfm1D3Z4R1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.34
Hfm1D3Z4R1 AC112142.1-201ENSMUST00000228796 918 ntBASIC29.7■■■□□ 2.34
Hfm1D3Z4R1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
Hfm1D3Z4R1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Hfm1D3Z4R1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Hfm1D3Z4R1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Hfm1D3Z4R1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC29.68■■■□□ 2.34
Hfm1D3Z4R1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC29.67■■■□□ 2.34
Hfm1D3Z4R1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Hfm1D3Z4R1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC29.67■■■□□ 2.34
Hfm1D3Z4R1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Hfm1D3Z4R1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Hfm1D3Z4R1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Hfm1D3Z4R1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Hfm1D3Z4R1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC29.65■■■□□ 2.34
Hfm1D3Z4R1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Hfm1D3Z4R1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Hfm1D3Z4R1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Hfm1D3Z4R1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Hfm1D3Z4R1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC29.63■■■□□ 2.33
Hfm1D3Z4R1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Hfm1D3Z4R1 Smad6-203ENSMUST00000179458 273 ntBASIC29.63■■■□□ 2.33
Hfm1D3Z4R1 Gm10033-202ENSMUST00000211874 928 ntBASIC29.63■■■□□ 2.33
Hfm1D3Z4R1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
Hfm1D3Z4R1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Hfm1D3Z4R1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Hfm1D3Z4R1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Hfm1D3Z4R1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
Hfm1D3Z4R1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Hfm1D3Z4R1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Hfm1D3Z4R1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Hfm1D3Z4R1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC29.62■■■□□ 2.33
Hfm1D3Z4R1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC29.62■■■□□ 2.33
Hfm1D3Z4R1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Hfm1D3Z4R1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Hfm1D3Z4R1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Hfm1D3Z4R1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
Hfm1D3Z4R1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Hfm1D3Z4R1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC29.6■■■□□ 2.33
Hfm1D3Z4R1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Hfm1D3Z4R1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Hfm1D3Z4R1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Hfm1D3Z4R1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Hfm1D3Z4R1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
Hfm1D3Z4R1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Hfm1D3Z4R1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC29.58■■■□□ 2.33
Hfm1D3Z4R1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Hfm1D3Z4R1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Hfm1D3Z4R1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
Hfm1D3Z4R1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Hfm1D3Z4R1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Hfm1D3Z4R1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC29.56■■■□□ 2.32
Hfm1D3Z4R1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
Hfm1D3Z4R1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms