Protein–RNA interactions for Protein: A0A0G2JEI6

Igkv6-29, Immunoglobulin kappa chain variable 6-29 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-29A0A0G2JEI6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv6-29A0A0G2JEI6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv6-29A0A0G2JEI6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv6-29A0A0G2JEI6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.58■□□□□ 0.89
Igkv6-29A0A0G2JEI6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.58■□□□□ 0.89
Igkv6-29A0A0G2JEI6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv6-29A0A0G2JEI6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv6-29A0A0G2JEI6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Igkv6-29A0A0G2JEI6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.56■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Mir7075-201ENSMUST00000184187 82 ntBASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Igkv6-29A0A0G2JEI6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.54■□□□□ 0.88
Igkv6-29A0A0G2JEI6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv6-29A0A0G2JEI6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.54■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.52■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv6-29A0A0G2JEI6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.52■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.51■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.51■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.49■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.49■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.49■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.48■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Gm8493-201ENSMUST00000196881 489 ntBASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Igkv6-29A0A0G2JEI6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms