Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV9A0A0B4J1U6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV9A0A0B4J1U6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV9A0A0B4J1U6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV9A0A0B4J1U6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRBV9A0A0B4J1U6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV9A0A0B4J1U6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV9A0A0B4J1U6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV9A0A0B4J1U6 AC010980.1-201ENST00000587192 1142 ntBASIC18.24■□□□□ 0.51
TRBV9A0A0B4J1U6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TRBV9A0A0B4J1U6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV9A0A0B4J1U6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV9A0A0B4J1U6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV9A0A0B4J1U6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRBV9A0A0B4J1U6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV9A0A0B4J1U6 AC011551.1-201ENST00000614101 683 ntBASIC18.23■□□□□ 0.51
TRBV9A0A0B4J1U6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV9A0A0B4J1U6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV9A0A0B4J1U6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRBV9A0A0B4J1U6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV9A0A0B4J1U6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV9A0A0B4J1U6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV9A0A0B4J1U6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV9A0A0B4J1U6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV9A0A0B4J1U6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV9A0A0B4J1U6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV9A0A0B4J1U6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV9A0A0B4J1U6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRBV9A0A0B4J1U6 MIR4508-201ENST00000584178 70 ntBASIC18.2■□□□□ 0.5
TRBV9A0A0B4J1U6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV9A0A0B4J1U6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV9A0A0B4J1U6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV9A0A0B4J1U6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV9A0A0B4J1U6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV9A0A0B4J1U6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV9A0A0B4J1U6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV9A0A0B4J1U6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV9A0A0B4J1U6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV9A0A0B4J1U6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV9A0A0B4J1U6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRBV9A0A0B4J1U6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 HLA-L-211ENST00000482052 1765 ntBASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.18■□□□□ 0.5
TRBV9A0A0B4J1U6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 DUSP8P5-201ENST00000422884 1815 ntBASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 KRT18P24-201ENST00000344739 1156 ntBASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 AC141586.4-201ENST00000624558 1573 ntBASIC18.17■□□□□ 0.5
TRBV9A0A0B4J1U6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV9A0A0B4J1U6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
TRBV9A0A0B4J1U6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRBV9A0A0B4J1U6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV9A0A0B4J1U6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV9A0A0B4J1U6 LINC01124-201ENST00000409786 2117 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms