Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-42A0A0A6YY38 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-42A0A0A6YY38 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-42A0A0A6YY38 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.2■□□□□ 0.66
Ighv1-42A0A0A6YY38 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ighv1-42A0A0A6YY38 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.2■□□□□ 0.66
Ighv1-42A0A0A6YY38 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-42A0A0A6YY38 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Gm43137-201ENSMUST00000198052 594 ntBASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-42A0A0A6YY38 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ighv1-42A0A0A6YY38 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-42A0A0A6YY38 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-42A0A0A6YY38 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-42A0A0A6YY38 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-42A0A0A6YY38 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.18■□□□□ 0.66
Ighv1-42A0A0A6YY38 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-42A0A0A6YY38 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-42A0A0A6YY38 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Ighv1-42A0A0A6YY38 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-42A0A0A6YY38 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-42A0A0A6YY38 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-42A0A0A6YY38 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ighv1-42A0A0A6YY38 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.17■□□□□ 0.66
Ighv1-42A0A0A6YY38 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ighv1-42A0A0A6YY38 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-42A0A0A6YY38 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-42A0A0A6YY38 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-42A0A0A6YY38 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-42A0A0A6YY38 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-42A0A0A6YY38 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Ighv1-42A0A0A6YY38 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ighv1-42A0A0A6YY38 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.16■□□□□ 0.66
Ighv1-42A0A0A6YY38 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-42A0A0A6YY38 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-42A0A0A6YY38 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ighv1-42A0A0A6YY38 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-42A0A0A6YY38 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.15■□□□□ 0.66
Ighv1-42A0A0A6YY38 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.15■□□□□ 0.66
Ighv1-42A0A0A6YY38 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-42A0A0A6YY38 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-42A0A0A6YY38 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ighv1-42A0A0A6YY38 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ighv1-42A0A0A6YY38 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-42A0A0A6YY38 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ighv1-42A0A0A6YY38 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.14■□□□□ 0.65
Ighv1-42A0A0A6YY38 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.14■□□□□ 0.65
Ighv1-42A0A0A6YY38 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-42A0A0A6YY38 Gm6139-201ENSMUST00000079261 882 ntBASIC19.14■□□□□ 0.65
Ighv1-42A0A0A6YY38 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-42A0A0A6YY38 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-42A0A0A6YY38 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-42A0A0A6YY38 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-42A0A0A6YY38 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-42A0A0A6YY38 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.13■□□□□ 0.65
Ighv1-42A0A0A6YY38 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-42A0A0A6YY38 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-42A0A0A6YY38 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-42A0A0A6YY38 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.13■□□□□ 0.65
Ighv1-42A0A0A6YY38 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-42A0A0A6YY38 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-42A0A0A6YY38 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-42A0A0A6YY38 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ighv1-42A0A0A6YY38 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-42A0A0A6YY38 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Ighv1-42A0A0A6YY38 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-42A0A0A6YY38 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Ighv1-42A0A0A6YY38 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-42A0A0A6YY38 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-42A0A0A6YY38 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Ighv1-42A0A0A6YY38 Mir7075-201ENSMUST00000184187 82 ntBASIC19.12■□□□□ 0.65
Ighv1-42A0A0A6YY38 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.11■□□□□ 0.65
Ighv1-42A0A0A6YY38 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ighv1-42A0A0A6YY38 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-42A0A0A6YY38 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-42A0A0A6YY38 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Ighv1-42A0A0A6YY38 Gm43530-201ENSMUST00000195920 274 ntBASIC19.11■□□□□ 0.65
Ighv1-42A0A0A6YY38 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-42A0A0A6YY38 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.11■□□□□ 0.65
Ighv1-42A0A0A6YY38 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ighv1-42A0A0A6YY38 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-42A0A0A6YY38 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-42A0A0A6YY38 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.1■□□□□ 0.65
Ighv1-42A0A0A6YY38 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-42A0A0A6YY38 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.09■□□□□ 0.65
Ighv1-42A0A0A6YY38 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 162.3 ms