Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Cap2-205ENSMUST00000225824 1634 ntBASIC17.67■□□□□ 0.42
Trbv23A0A0A6YWQ1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv23A0A0A6YWQ1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv23A0A0A6YWQ1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv23A0A0A6YWQ1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv23A0A0A6YWQ1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.66■□□□□ 0.42
Trbv23A0A0A6YWQ1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv23A0A0A6YWQ1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trbv23A0A0A6YWQ1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv23A0A0A6YWQ1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trbv23A0A0A6YWQ1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv23A0A0A6YWQ1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv23A0A0A6YWQ1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Trbv23A0A0A6YWQ1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trbv23A0A0A6YWQ1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.65■□□□□ 0.42
Trbv23A0A0A6YWQ1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv23A0A0A6YWQ1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trbv23A0A0A6YWQ1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv23A0A0A6YWQ1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv23A0A0A6YWQ1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv23A0A0A6YWQ1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv23A0A0A6YWQ1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv23A0A0A6YWQ1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv23A0A0A6YWQ1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trbv23A0A0A6YWQ1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv23A0A0A6YWQ1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trbv23A0A0A6YWQ1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.62■□□□□ 0.41
Trbv23A0A0A6YWQ1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trbv23A0A0A6YWQ1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv23A0A0A6YWQ1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trbv23A0A0A6YWQ1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv23A0A0A6YWQ1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Trbv23A0A0A6YWQ1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trbv23A0A0A6YWQ1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv23A0A0A6YWQ1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv23A0A0A6YWQ1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Trbv23A0A0A6YWQ1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv23A0A0A6YWQ1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv23A0A0A6YWQ1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.59■□□□□ 0.41
Trbv23A0A0A6YWQ1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv23A0A0A6YWQ1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv23A0A0A6YWQ1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trbv23A0A0A6YWQ1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv23A0A0A6YWQ1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trbv23A0A0A6YWQ1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Trbv23A0A0A6YWQ1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv23A0A0A6YWQ1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv23A0A0A6YWQ1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv23A0A0A6YWQ1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv23A0A0A6YWQ1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv23A0A0A6YWQ1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv23A0A0A6YWQ1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv23A0A0A6YWQ1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv23A0A0A6YWQ1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.58■□□□□ 0.4
Trbv23A0A0A6YWQ1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trbv23A0A0A6YWQ1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms