Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14d-1A0A075B6B1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14d-1A0A075B6B1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14d-1A0A075B6B1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav14d-1A0A075B6B1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14d-1A0A075B6B1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav14d-1A0A075B6B1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav14d-1A0A075B6B1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav14d-1A0A075B6B1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14d-1A0A075B6B1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Gm44428-201ENSMUST00000204474 874 ntBASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14d-1A0A075B6B1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Trav14d-1A0A075B6B1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav14d-1A0A075B6B1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav14d-1A0A075B6B1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav14d-1A0A075B6B1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14d-1A0A075B6B1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14d-1A0A075B6B1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14d-1A0A075B6B1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14d-1A0A075B6B1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms