Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-7A0A075B6B0 Gm13238-201ENSMUST00000117655 780 ntBASIC15.86■□□□□ 0.13
Trav6d-7A0A075B6B0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav6d-7A0A075B6B0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6d-7A0A075B6B0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-7A0A075B6B0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-7A0A075B6B0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6d-7A0A075B6B0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-7A0A075B6B0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6d-7A0A075B6B0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6d-7A0A075B6B0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6d-7A0A075B6B0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-7A0A075B6B0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
Trav6d-7A0A075B6B0 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.83■□□□□ 0.12
Trav6d-7A0A075B6B0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
Trav6d-7A0A075B6B0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav6d-7A0A075B6B0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-7A0A075B6B0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-7A0A075B6B0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-7A0A075B6B0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-7A0A075B6B0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-7A0A075B6B0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-7A0A075B6B0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav6d-7A0A075B6B0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-7A0A075B6B0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-7A0A075B6B0 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.81■□□□□ 0.12
Trav6d-7A0A075B6B0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav6d-7A0A075B6B0 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.81■□□□□ 0.12
Trav6d-7A0A075B6B0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav6d-7A0A075B6B0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-7A0A075B6B0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-7A0A075B6B0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-7A0A075B6B0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-7A0A075B6B0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-7A0A075B6B0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trav6d-7A0A075B6B0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav6d-7A0A075B6B0 Rps24-207ENSMUST00000224568 714 ntBASIC15.8■□□□□ 0.12
Trav6d-7A0A075B6B0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-7A0A075B6B0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav6d-7A0A075B6B0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav6d-7A0A075B6B0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 172.7 ms