Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.691e-8■□□□□ 8.8
RPS3P23396 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.261e-8■□□□□ 8.8
RPS3P23396 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.26■□□□□ 0.031e-8■□□□□ 8.8
RPS3P23396 SEMA4C-203ENST00000449330 839 ntTSL 314.22□□□□□ -0.131e-8■□□□□ 8.8
RPS3P23396 DCTN5-205ENST00000566053 571 ntTSL 47.28□□□□□ -1.242e-6■□□□□ 8.7
RPS3P23396 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC7.17□□□□□ -1.262e-6■□□□□ 8.7
RPS3P23396 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.442e-6■□□□□ 8.7
RPS3P23396 OCIAD1-223ENST00000511662 441 ntTSL 518.52■□□□□ 0.561e-8■□□□□ 8.7
RPS3P23396 HMGN1-206ENST00000431390 1552 ntTSL 318.08■□□□□ 0.481e-8■□□□□ 8.7
RPS3P23396 HMGN1-207ENST00000436324 1045 ntTSL 217.71■□□□□ 0.431e-8■□□□□ 8.7
RPS3P23396 HMGN1-219ENST00000491183 527 ntTSL 217.36■□□□□ 0.371e-8■□□□□ 8.7
RPS3P23396 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.241e-8■□□□□ 8.7
RPS3P23396 HMGN1-209ENST00000463631 583 ntTSL 316.43■□□□□ 0.221e-8■□□□□ 8.7
RPS3P23396 HMGN1-210ENST00000464078 508 ntTSL 516.43■□□□□ 0.221e-8■□□□□ 8.7
RPS3P23396 HMGN1-214ENST00000482733 701 ntTSL 216.24■□□□□ 0.191e-8■□□□□ 8.7
RPS3P23396 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.19■□□□□ 0.181e-8■□□□□ 8.7
RPS3P23396 HMGN1-212ENST00000479586 841 ntTSL 216.19■□□□□ 0.181e-8■□□□□ 8.7
RPS3P23396 OCIAD1-227ENST00000513641 577 ntTSL 515.03■□□□□ -01e-8■□□□□ 8.7
RPS3P23396 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.77□□□□□ -0.211e-8■□□□□ 8.7
RPS3P23396 HMGN1-208ENST00000443046 823 ntTSL 313.58□□□□□ -0.241e-8■□□□□ 8.7
RPS3P23396 HMGN1-216ENST00000486741 4299 ntTSL 212.78□□□□□ -0.361e-8■□□□□ 8.7
RPS3P23396 OCIAD1-215ENST00000508996 348 ntTSL 412.67□□□□□ -0.381e-8■□□□□ 8.7
RPS3P23396 HMGN1-220ENST00000492280 2707 ntTSL 512.17□□□□□ -0.461e-8■□□□□ 8.7
RPS3P23396 OCIAD1-219ENST00000509664 538 ntTSL 511.78□□□□□ -0.521e-8■□□□□ 8.7
RPS3P23396 OCIAD1-217ENST00000509164 563 ntTSL 411.69□□□□□ -0.541e-8■□□□□ 8.7
RPS3P23396 HMGN1-202ENST00000380747 709 ntTSL 3 BASIC8.99□□□□□ -0.971e-8■□□□□ 8.7
RPS3P23396 OCIAD1-212ENST00000507546 496 ntTSL 28.92□□□□□ -0.981e-8■□□□□ 8.7
RPS3P23396 HMGN1-205ENST00000419378 850 ntTSL 26.69□□□□□ -1.341e-8■□□□□ 8.7
RPS3P23396 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.023e-6■□□□□ 8.7
RPS3P23396 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.793e-6■□□□□ 8.7
RPS3P23396 SARAF-209ENST00000521934 543 ntTSL 25.1□□□□□ -1.592e-8■□□□□ 8.7
RPS3P23396 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)16.48■□□□□ 0.235e-11■□□□□ 8.7
RPS3P23396 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.375e-11■□□□□ 8.7
RPS3P23396 CLUH-212ENST00000575624 595 ntTSL 324.05■■□□□ 1.442e-7■□□□□ 8.7
RPS3P23396 PBX2-202ENST00000478678 1320 ntTSL 1 (best)21.43■■□□□ 1.022e-7■□□□□ 8.7
RPS3P23396 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.65■□□□□ 0.92e-7■□□□□ 8.7
RPS3P23396 APRT-205ENST00000564858 584 ntTSL 220.46■□□□□ 0.872e-7■□□□□ 8.7
RPS3P23396 CLCN7-213ENST00000567836 647 ntTSL 219.35■□□□□ 0.692e-7■□□□□ 8.7
RPS3P23396 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.382e-7■□□□□ 8.7
RPS3P23396 LSM14A-207ENST00000589878 559 ntTSL 417.23■□□□□ 0.352e-7■□□□□ 8.7
RPS3P23396 CLUH-211ENST00000575014 4959 ntAPPRIS ALT2 TSL 517.22■□□□□ 0.352e-7■□□□□ 8.7
RPS3P23396 SLC2A9-206ENST00000505104 1659 ntTSL 1 (best)17.03■□□□□ 0.322e-7■□□□□ 8.7
RPS3P23396 RPL18A-207ENST00000602216 907 ntTSL 216.88■□□□□ 0.293e-17■□□□□ 8.7
RPS3P23396 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.272e-7■□□□□ 8.7
RPS3P23396 FKBP8-205ENST00000596494 439 ntTSL 316.66■□□□□ 0.262e-7■□□□□ 8.7
RPS3P23396 FAM210B-202ENST00000437418 614 ntTSL 316.37■□□□□ 0.215e-14■□□□□ 8.7
RPS3P23396 CLCN7-209ENST00000565092 2740 ntTSL 216.15■□□□□ 0.182e-7■□□□□ 8.7
RPS3P23396 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.155e-14■□□□□ 8.7
RPS3P23396 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.112e-7■□□□□ 8.7
RPS3P23396 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.092e-7■□□□□ 8.7
RPS3P23396 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.063e-17■□□□□ 8.7
RPS3P23396 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.022e-7■□□□□ 8.7
RPS3P23396 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.11□□□□□ -0.152e-7■□□□□ 8.7
RPS3P23396 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.93□□□□□ -0.183e-17■□□□□ 8.7
RPS3P23396 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.9□□□□□ -0.183e-17■□□□□ 8.7
RPS3P23396 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.232e-7■□□□□ 8.7
RPS3P23396 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.52□□□□□ -0.252e-7■□□□□ 8.7
RPS3P23396 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.252e-7■□□□□ 8.7
RPS3P23396 CLCN7-205ENST00000563642 4184 ntTSL 213.45□□□□□ -0.262e-7■□□□□ 8.7
RPS3P23396 RPL18A-202ENST00000597648 683 ntTSL 313.32□□□□□ -0.283e-17■□□□□ 8.7
RPS3P23396 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.11□□□□□ -0.313e-17■□□□□ 8.7
RPS3P23396 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.352e-7■□□□□ 8.7
RPS3P23396 RPL18A-206ENST00000600238 954 ntTSL 211.11□□□□□ -0.633e-17■□□□□ 8.7
RPS3P23396 SLC2A9-213ENST00000513129 738 ntTSL 310.13□□□□□ -0.792e-7■□□□□ 8.7
RPS3P23396 NASP-209ENST00000472408 541 ntTSL 29.94□□□□□ -0.821e-10■□□□□ 8.7
RPS3P23396 NASP-221ENST00000531612 938 ntAPPRIS ALT2 TSL 58.22□□□□□ -1.091e-10■□□□□ 8.7
RPS3P23396 DCTN5-203ENST00000563614 3405 nt7.81□□□□□ -1.162e-7■□□□□ 8.7
RPS3P23396 NASP-218ENST00000530073 2740 ntTSL 27.75□□□□□ -1.171e-10■□□□□ 8.7
RPS3P23396 NASP-210ENST00000481782 3659 ntTSL 27.4□□□□□ -1.221e-10■□□□□ 8.7
RPS3P23396 NASP-223ENST00000534450 632 ntTSL 27.38□□□□□ -1.231e-10■□□□□ 8.7
RPS3P23396 EMP2-201ENST00000342147 3582 ntTSL 27.23□□□□□ -1.252e-7■□□□□ 8.7
RPS3P23396 GLS-207ENST00000417154 837 ntTSL 35.55□□□□□ -1.522e-7■□□□□ 8.7
RPS3P23396 GLS-211ENST00000469774 557 ntTSL 34.08□□□□□ -1.762e-7■□□□□ 8.7
RPS3P23396 LDB1-204ENST00000490751 762 ntTSL 230.32■■■□□ 2.446e-6■□□□□ 8.7
RPS3P23396 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.3■■□□□ 1.86e-6■□□□□ 8.7
RPS3P23396 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.166e-6■□□□□ 8.7
RPS3P23396 EMD-205ENST00000471965 800 ntTSL 222.23■■□□□ 1.156e-6■□□□□ 8.7
RPS3P23396 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.126e-6■□□□□ 8.7
RPS3P23396 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.85■■□□□ 1.096e-6■□□□□ 8.7
RPS3P23396 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.84■■□□□ 1.096e-6■□□□□ 8.7
RPS3P23396 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.786e-6■□□□□ 8.7
RPS3P23396 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.82■□□□□ 0.766e-6■□□□□ 8.7
RPS3P23396 PTBP1-218ENST00000592804 742 ntTSL 219.03■□□□□ 0.641e-20■□□□□ 8.7
RPS3P23396 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.62■□□□□ 0.576e-6■□□□□ 8.7
RPS3P23396 CORO7-212ENST00000572125 681 ntTSL 318.54■□□□□ 0.566e-6■□□□□ 8.7
RPS3P23396 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.15■□□□□ 0.56e-6■□□□□ 8.7
RPS3P23396 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.456e-6■□□□□ 8.7
RPS3P23396 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.46e-6■□□□□ 8.7
RPS3P23396 EMD-203ENST00000428228 946 ntTSL 317.51■□□□□ 0.396e-6■□□□□ 8.7
RPS3P23396 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.386e-6■□□□□ 8.7
RPS3P23396 EMD-208ENST00000492448 832 ntTSL 217.3■□□□□ 0.366e-6■□□□□ 8.7
RPS3P23396 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.19■□□□□ 0.346e-6■□□□□ 8.7
RPS3P23396 EMD-207ENST00000486738 1284 ntTSL 317.09■□□□□ 0.336e-6■□□□□ 8.7
RPS3P23396 CORO7-232ENST00000576637 730 ntTSL 316.05■□□□□ 0.166e-6■□□□□ 8.7
RPS3P23396 TMC6-222ENST00000592076 693 ntTSL 315.79■□□□□ 0.126e-6■□□□□ 8.7
RPS3P23396 CORO7-217ENST00000572666 1237 ntTSL 515.76■□□□□ 0.116e-6■□□□□ 8.7
RPS3P23396 NMT1-208ENST00000588975 183 ntTSL 1 (best)15.2■□□□□ 0.026e-6■□□□□ 8.7
RPS3P23396 CORO7-226ENST00000575531 2636 ntTSL 214.32□□□□□ -0.126e-6■□□□□ 8.7
RPS3P23396 PRKAB1-203ENST00000537400 555 ntTSL 313.93□□□□□ -0.186e-6■□□□□ 8.7
RPS3P23396 UBQLN1-204ENST00000527373 562 ntTSL 210.29□□□□□ -0.766e-6■□□□□ 8.7
Retrieved 100 of 24,271 protein–RNA pairs in 65.7 ms