Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 NEU4-217ENST00000618597 3013 ntTSL 218.9■□□□□ 0.621e-7■□□□□ 8.9
RPS3P23396 NEU4-206ENST00000415936 860 ntTSL 317.41■□□□□ 0.381e-7■□□□□ 8.9
RPS3P23396 NEU4-208ENST00000423583 753 ntTSL 517.19■□□□□ 0.341e-7■□□□□ 8.9
RPS3P23396 PPP4R2-203ENST00000470976 1033 ntTSL 226.57■■□□□ 1.849e-7■□□□□ 8.9
RPS3P23396 PPP4R2-206ENST00000488810 877 ntTSL 525.92■■□□□ 1.749e-7■□□□□ 8.9
RPS3P23396 PPP4R2-205ENST00000482242 771 ntTSL 325.82■■□□□ 1.729e-7■□□□□ 8.9
RPS3P23396 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.189e-7■□□□□ 8.9
RPS3P23396 FASTK-213ENST00000482806 1826 ntTSL 522.37■■□□□ 1.179e-7■□□□□ 8.9
RPS3P23396 FASTK-215ENST00000489884 1751 ntTSL 1 (best)21.71■■□□□ 1.079e-7■□□□□ 8.9
RPS3P23396 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.36■■□□□ 1.019e-7■□□□□ 8.9
RPS3P23396 FASTK-216ENST00000496663 818 ntTSL 221.36■■□□□ 1.019e-7■□□□□ 8.9
RPS3P23396 FASTK-205ENST00000461979 720 ntTSL 520.66■□□□□ 0.99e-7■□□□□ 8.9
RPS3P23396 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.36■□□□□ 0.859e-7■□□□□ 8.9
RPS3P23396 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.839e-7■□□□□ 8.9
RPS3P23396 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.759e-7■□□□□ 8.9
RPS3P23396 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.659e-7■□□□□ 8.9
RPS3P23396 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.59e-7■□□□□ 8.9
RPS3P23396 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.88■□□□□ 0.459e-7■□□□□ 8.9
RPS3P23396 PDLIM7-207ENST00000486828 1904 ntTSL 1 (best)17.76■□□□□ 0.439e-7■□□□□ 8.9
RPS3P23396 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.419e-7■□□□□ 8.9
RPS3P23396 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.49e-7■□□□□ 8.9
RPS3P23396 PDLIM7-208ENST00000493815 1686 ntTSL 1 (best)17.54■□□□□ 0.49e-7■□□□□ 8.9
RPS3P23396 FKBP8-204ENST00000596015 612 ntTSL 316.55■□□□□ 0.242e-7■□□□□ 8.9
RPS3P23396 FASTK-204ENST00000460980 1521 ntTSL 515.51■□□□□ 0.079e-7■□□□□ 8.9
RPS3P23396 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.01□□□□□ -0.019e-7■□□□□ 8.9
RPS3P23396 SF1-211ENST00000448404 2778 ntTSL 1 (best)14.45□□□□□ -0.19e-7■□□□□ 8.9
RPS3P23396 FKBP8-212ENST00000606531 460 ntTSL 214.17□□□□□ -0.149e-7■□□□□ 8.9
RPS3P23396 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.249e-7■□□□□ 8.9
RPS3P23396 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.48□□□□□ -0.259e-7■□□□□ 8.9
RPS3P23396 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.42□□□□□ -0.269e-7■□□□□ 8.9
RPS3P23396 SF1-210ENST00000443908 767 ntTSL 313.32□□□□□ -0.289e-7■□□□□ 8.9
RPS3P23396 SF1-216ENST00000486867 875 ntTSL 312.9□□□□□ -0.349e-7■□□□□ 8.9
RPS3P23396 IST1-223ENST00000545518 710 ntTSL 211.83□□□□□ -0.529e-7■□□□□ 8.9
RPS3P23396 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.529e-7■□□□□ 8.9
RPS3P23396 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.049e-7■□□□□ 8.9
RPS3P23396 CD53-203ENST00000471220 657 ntTSL 28.09□□□□□ -1.119e-7■□□□□ 8.9
RPS3P23396 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.05□□□□□ -1.129e-7■□□□□ 8.9
RPS3P23396 GXYLT2-202ENST00000491839 494 ntTSL 35.54□□□□□ -1.529e-7■□□□□ 8.9
RPS3P23396 KPNB1-208ENST00000580019 427 ntTSL 22.02□□□□□ -2.099e-7■□□□□ 8.9
RPS3P23396 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.56■■□□□ 1.29e-9■□□□□ 8.9
RPS3P23396 PRMT5-222ENST00000556426 563 ntTSL 319.26■□□□□ 0.679e-9■□□□□ 8.9
RPS3P23396 PRMT5-224ENST00000557015 628 ntTSL 219.18■□□□□ 0.669e-9■□□□□ 8.9
RPS3P23396 GMDS-203ENST00000467288 900 ntTSL 518.84■□□□□ 0.619e-9■□□□□ 8.9
RPS3P23396 GMDS-204ENST00000476972 591 ntTSL 218.47■□□□□ 0.559e-9■□□□□ 8.9
RPS3P23396 GMDS-205ENST00000486793 567 ntTSL 317.86■□□□□ 0.459e-9■□□□□ 8.9
RPS3P23396 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.39e-9■□□□□ 8.9
RPS3P23396 SORL1-206ENST00000527934 3032 ntTSL 2 BASIC10.75□□□□□ -0.692e-6■□□□□ 8.9
RPS3P23396 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC9□□□□□ -0.972e-6■□□□□ 8.9
RPS3P23396 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.54□□□□□ -1.042e-6■□□□□ 8.9
RPS3P23396 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.03□□□□□ -1.122e-6■□□□□ 8.9
RPS3P23396 CLSTN1-204ENST00000464286 563 ntTSL 26.96□□□□□ -1.39e-9■□□□□ 8.9
RPS3P23396 PRMT5-220ENST00000556032 643 ntTSL 56.56□□□□□ -1.369e-9■□□□□ 8.9
RPS3P23396 TMBIM6-205ENST00000546885 578 ntTSL 418.06■□□□□ 0.483e-20■□□□□ 8.8
RPS3P23396 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.382e-12■□□□□ 8.8
RPS3P23396 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.162e-12■□□□□ 8.8
RPS3P23396 CCNI-202ENST00000504697 610 ntTSL 410.56□□□□□ -0.729e-7■□□□□ 8.8
RPS3P23396 CCNI-207ENST00000513774 517 ntTSL 47.79□□□□□ -1.169e-7■□□□□ 8.8
RPS3P23396 CCNI-203ENST00000505609 541 ntTSL 46.26□□□□□ -1.419e-7■□□□□ 8.8
RPS3P23396 CCNI-206ENST00000511943 576 ntTSL 30.42□□□□□ -2.349e-7■□□□□ 8.8
RPS3P23396 EEF1A1-205ENST00000455918 701 ntTSL 218.72■□□□□ 0.592e-61■□□□□ 8.8
RPS3P23396 EEF1A1-204ENST00000356303 635 ntTSL 28.48□□□□□ -1.052e-61■□□□□ 8.8
RPS3P23396 SARAF-212ENST00000523127 735 ntTSL 54.8□□□□□ -1.641e-8■□□□□ 8.8
RPS3P23396 SARAF-204ENST00000518296 878 ntTSL 23.96□□□□□ -1.781e-8■□□□□ 8.8
RPS3P23396 ATP5I-203ENST00000506525 496 ntTSL 1 (best)14.32□□□□□ -0.123e-9■□□□□ 8.8
RPS3P23396 ATP5I-205ENST00000515202 393 ntTSL 26.61□□□□□ -1.353e-9■□□□□ 8.8
RPS3P23396 ATP5I-204ENST00000515116 247 ntTSL 24.21□□□□□ -1.743e-9■□□□□ 8.8
RPS3P23396 ITGB1-217ENST00000494395 562 ntTSL 38.55□□□□□ -1.046e-10■□□□□ 8.8
RPS3P23396 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.67■□□□□ 0.261e-6■□□□□ 8.8
RPS3P23396 DUSP6-203ENST00000547140 604 ntTSL 315.47■□□□□ 0.071e-6■□□□□ 8.8
RPS3P23396 GNAS-236ENST00000479025 466 ntTSL 213.3□□□□□ -0.285e-12■□□□□ 8.8
RPS3P23396 SEC23A-211ENST00000555682 398 ntTSL 20.55□□□□□ -2.325e-12■□□□□ 8.8
RPS3P23396 OAZ1-206ENST00000589739 657 ntTSL 217.53■□□□□ 0.43e-47■□□□□ 8.8
RPS3P23396 TMEM259-210ENST00000592618 1877 ntTSL 524.49■■□□□ 1.512e-9■□□□□ 8.8
RPS3P23396 TMEM259-208ENST00000592052 1637 nt24.4■■□□□ 1.52e-9■□□□□ 8.8
RPS3P23396 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.062e-9■□□□□ 8.8
RPS3P23396 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.872e-9■□□□□ 8.8
RPS3P23396 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.91■□□□□ 0.622e-9■□□□□ 8.8
RPS3P23396 TMEM259-211ENST00000593068 1965 ntTSL 517.69■□□□□ 0.422e-9■□□□□ 8.8
RPS3P23396 TMEM259-205ENST00000586704 2538 ntTSL 517.62■□□□□ 0.412e-9■□□□□ 8.8
RPS3P23396 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.53■□□□□ 0.082e-6■□□□□ 8.8
RPS3P23396 AGRN-207ENST00000478677 276 ntTSL 211.37□□□□□ -0.591e-14■□□□□ 8.8
RPS3P23396 PCSK6-207ENST00000558951 543 ntTSL 38.95□□□□□ -0.982e-6■□□□□ 8.8
RPS3P23396 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.022e-15■□□□□ 8.8
RPS3P23396 ACP1-208ENST00000442386 546 ntTSL 418.44■□□□□ 0.542e-15■□□□□ 8.8
RPS3P23396 ACP1-202ENST00000272067 1552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.512e-15■□□□□ 8.8
RPS3P23396 ACP1-206ENST00000413140 689 ntTSL 211.1□□□□□ -0.632e-15■□□□□ 8.8
RPS3P23396 ACP1-210ENST00000463831 1015 ntTSL 211.1□□□□□ -0.632e-15■□□□□ 8.8
RPS3P23396 ACP1-209ENST00000453390 577 ntTSL 1 (best)10.88□□□□□ -0.672e-15■□□□□ 8.8
RPS3P23396 ACP1-213ENST00000484464 573 ntTSL 48.1□□□□□ -1.112e-15■□□□□ 8.8
RPS3P23396 AUP1-205ENST00000464887 845 ntTSL 213.49□□□□□ -0.252e-13■□□□□ 8.8
RPS3P23396 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.84■□□□□ 0.453e-6■□□□□ 8.8
RPS3P23396 DCTN5-202ENST00000563188 547 ntTSL 516.62■□□□□ 0.253e-6■□□□□ 8.8
RPS3P23396 DCTN5-206ENST00000566298 744 ntTSL 46.92□□□□□ -1.33e-6■□□□□ 8.8
RPS3P23396 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.36□□□□□ -0.273e-15■□□□□ 8.8
RPS3P23396 PFDN5-208ENST00000549995 598 ntTSL 311.71□□□□□ -0.533e-15■□□□□ 8.8
RPS3P23396 PFDN5-210ENST00000550513 939 ntTSL 310.36□□□□□ -0.753e-15■□□□□ 8.8
RPS3P23396 PFDN5-215ENST00000551223 478 ntTSL 49.28□□□□□ -0.923e-15■□□□□ 8.8
RPS3P23396 PFDN5-205ENST00000547228 726 ntTSL 55.24□□□□□ -1.573e-15■□□□□ 8.8
RPS3P23396 PFDN5-209ENST00000550069 599 ntTSL 25.24□□□□□ -1.573e-15■□□□□ 8.8
RPS3P23396 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.17■□□□□ 0.821e-8■□□□□ 8.8
Retrieved 100 of 24,271 protein–RNA pairs in 544.3 ms