Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.125e-6■□□□□ 9.1
RPS3P23396 SLC13A3-203ENST00000372121 848 ntTSL 515.62■□□□□ 0.095e-6■□□□□ 9.1
RPS3P23396 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.095e-6■□□□□ 9.1
RPS3P23396 NDUFV1-204ENST00000524876 584 ntTSL 415.48■□□□□ 0.078e-13■□□□□ 9.1
RPS3P23396 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.045e-6■□□□□ 9.1
RPS3P23396 RPLP2-208ENST00000532004 353 ntTSL 315.03■□□□□ -05e-9■□□□□ 9.1
RPS3P23396 TTC38-203ENST00000421359 821 ntTSL 415.02■□□□□ -05e-6■□□□□ 9.1
RPS3P23396 NOL7-201ENST00000420088 646 ntTSL 214.72□□□□□ -0.051e-12■□□□□ 9.1
RPS3P23396 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.15e-6■□□□□ 9.1
RPS3P23396 SNRPN-209ENST00000579070 871 ntTSL 314.26□□□□□ -0.135e-6■□□□□ 9.1
RPS3P23396 SNRPN-210ENST00000584968 908 ntTSL 514.16□□□□□ -0.145e-6■□□□□ 9.1
RPS3P23396 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.155e-6■□□□□ 9.1
RPS3P23396 SNURF-203ENST00000580062 796 ntTSL 314.06□□□□□ -0.165e-6■□□□□ 9.1
RPS3P23396 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.84□□□□□ -0.195e-6■□□□□ 9.1
RPS3P23396 NDUFV1-212ENST00000528328 477 ntTSL 413.13□□□□□ -0.318e-13■□□□□ 9.1
RPS3P23396 TTC38-204ENST00000422713 828 ntTSL 512.7□□□□□ -0.385e-6■□□□□ 9.1
RPS3P23396 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.385e-6■□□□□ 9.1
RPS3P23396 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.465e-6■□□□□ 9.1
RPS3P23396 SNRPB2-203ENST00000478522 540 ntTSL 212.11□□□□□ -0.475e-6■□□□□ 9.1
RPS3P23396 SLC38A3-202ENST00000417851 438 ntTSL 311.98□□□□□ -0.495e-6■□□□□ 9.1
RPS3P23396 CLDN12-213ENST00000496677 1098 ntTSL 1 (best)11.95□□□□□ -0.55e-6■□□□□ 9.1
RPS3P23396 RPLP2-206ENST00000530398 313 ntTSL 311.44□□□□□ -0.585e-9■□□□□ 9.1
RPS3P23396 RPLP2-205ENST00000527517 646 ntTSL 211.39□□□□□ -0.595e-9■□□□□ 9.1
RPS3P23396 NDUFV1-214ENST00000528548 579 ntTSL 410.96□□□□□ -0.658e-13■□□□□ 9.1
RPS3P23396 RPLP2-203ENST00000525722 489 ntTSL 210.84□□□□□ -0.675e-9■□□□□ 9.1
RPS3P23396 RPLP2-204ENST00000526222 350 ntTSL 210.84□□□□□ -0.675e-9■□□□□ 9.1
RPS3P23396 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.685e-6■□□□□ 9.1
RPS3P23396 GUCD1-210ENST00000490810 346 ntTSL 210.72□□□□□ -0.695e-6■□□□□ 9.1
RPS3P23396 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.695e-6■□□□□ 9.1
RPS3P23396 NDUFV1-206ENST00000526138 557 ntTSL 49.38□□□□□ -0.918e-13■□□□□ 9.1
RPS3P23396 CLDN12-204ENST00000416322 1163 ntTSL 59.37□□□□□ -0.915e-6■□□□□ 9.1
RPS3P23396 DCTN1-224ENST00000495895 503 ntTSL 29.3□□□□□ -0.925e-6■□□□□ 9.1
RPS3P23396 CLDN12-202ENST00000394604 846 ntTSL 59.03□□□□□ -0.965e-6■□□□□ 9.1
RPS3P23396 SNRPN-204ENST00000400098 525 ntTSL 48.71□□□□□ -1.025e-6■□□□□ 9.1
RPS3P23396 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC8.48□□□□□ -1.055e-6■□□□□ 9.1
RPS3P23396 NOL7-203ENST00000474485 920 ntTSL 37.92□□□□□ -1.141e-12■□□□□ 9.1
RPS3P23396 SNRPN-206ENST00000553597 849 ntTSL 37.85□□□□□ -1.155e-6■□□□□ 9.1
RPS3P23396 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.185e-6■□□□□ 9.1
RPS3P23396 ERBB3-218ENST00000551176 277 ntTSL 1 (best)7.39□□□□□ -1.235e-6■□□□□ 9.1
RPS3P23396 CLDN12-205ENST00000427904 618 ntTSL 37.38□□□□□ -1.235e-6■□□□□ 9.1
RPS3P23396 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.295e-6■□□□□ 9.1
RPS3P23396 AC124312.1-202ENST00000557230 669 ntAPPRIS ALT2 TSL 56.87□□□□□ -1.315e-6■□□□□ 9.1
RPS3P23396 CS-203ENST00000546585 1803 ntTSL 26.87□□□□□ -1.315e-6■□□□□ 9.1
RPS3P23396 RAB6A-205ENST00000537446 447 ntTSL 36.86□□□□□ -1.315e-6■□□□□ 9.1
RPS3P23396 RAB6A-210ENST00000545625 447 ntTSL 36.86□□□□□ -1.315e-6■□□□□ 9.1
RPS3P23396 RPS7-206ENST00000472966 556 ntTSL 1 (best)6.43□□□□□ -1.385e-6■□□□□ 9.1
RPS3P23396 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.45e-6■□□□□ 9.1
RPS3P23396 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.525e-6■□□□□ 9.1
RPS3P23396 SCARB2-217ENST00000639324 842 ntTSL 54.98□□□□□ -1.615e-6■□□□□ 9.1
RPS3P23396 CLDN12-214ENST00000498033 420 ntTSL 34.6□□□□□ -1.675e-6■□□□□ 9.1
RPS3P23396 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.36□□□□□ -1.715e-6■□□□□ 9.1
RPS3P23396 IL6ST-210ENST00000503773 3031 ntTSL 52.67□□□□□ -1.985e-6■□□□□ 9.1
RPS3P23396 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.41□□□□□ -2.025e-6■□□□□ 9.1
RPS3P23396 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.37□□□□□ -2.035e-6■□□□□ 9.1
RPS3P23396 FKBP4-207ENST00000544366 287 ntTSL 32.31□□□□□ -2.045e-6■□□□□ 9.1
RPS3P23396 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.15e-6■□□□□ 9.1
RPS3P23396 IL6ST-214ENST00000577363 282 ntTSL 51.5□□□□□ -2.175e-6■□□□□ 9.1
RPS3P23396 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.255e-6■□□□□ 9.1
RPS3P23396 CLDN12-206ENST00000451941 527 ntTSL 30.18□□□□□ -2.385e-6■□□□□ 9.1
RPS3P23396 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.08□□□□□ -2.45e-6■□□□□ 9.1
RPS3P23396 TJP1-206ENST00000473741 270 ntTSL 2-0.14□□□□□ -2.435e-6■□□□□ 9.1
RPS3P23396 CLDN12-210ENST00000483862 338 ntTSL 2-0.24□□□□□ -2.455e-6■□□□□ 9.1
RPS3P23396 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.94□□□□□ -2.725e-6■□□□□ 9.1
RPS3P23396 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.583e-9■□□□□ 9.1
RPS3P23396 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.463e-9■□□□□ 9.1
RPS3P23396 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.97■□□□□ 0.313e-9■□□□□ 9.1
RPS3P23396 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.13e-9■□□□□ 9.1
RPS3P23396 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC11.92□□□□□ -0.53e-9■□□□□ 9.1
RPS3P23396 TMEM123-204ENST00000526676 467 ntTSL 414.71□□□□□ -0.051e-7■□□□□ 9.1
RPS3P23396 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.31e-7■□□□□ 9.1
RPS3P23396 TMEM123-207ENST00000531103 568 ntTSL 42.08□□□□□ -2.081e-7■□□□□ 9.1
RPS3P23396 TMEM123-205ENST00000528969 568 ntAPPRIS ALT2 TSL 40.63□□□□□ -2.311e-7■□□□□ 9.1
RPS3P23396 PIM1-203ENST00000479509 675 ntTSL 212.44□□□□□ -0.422e-23■□□□□ 9.1
RPS3P23396 PIM1-202ENST00000468243 818 ntTSL 1 (best)10.75□□□□□ -0.692e-23■□□□□ 9.1
RPS3P23396 ACTR2-203ENST00000471552 554 ntTSL 414.41□□□□□ -0.11e-6■□□□□ 9.1
RPS3P23396 ACTR2-204ENST00000476840 587 ntTSL 412.94□□□□□ -0.341e-6■□□□□ 9.1
RPS3P23396 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.2■□□□□ 0.341e-7■□□□□ 9.1
RPS3P23396 FKBP10-208ENST00000585664 598 ntTSL 312.61□□□□□ -0.394e-12■□□□□ 9.1
RPS3P23396 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.4■□□□□ 0.382e-6■□□□□ 9.1
RPS3P23396 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.472e-6■□□□□ 9.1
RPS3P23396 NT5E-203ENST00000369651 3918 ntTSL 2 BASIC11.19□□□□□ -0.622e-6■□□□□ 9.1
RPS3P23396 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.72■■□□□ 1.392e-8■□□□□ 9.1
RPS3P23396 UBE2D2-204ENST00000505007 1170 ntTSL 318.51■□□□□ 0.552e-8■□□□□ 9.1
RPS3P23396 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.392e-8■□□□□ 9.1
RPS3P23396 SSBP1-207ENST00000468267 800 ntTSL 216.56■□□□□ 0.242e-8■□□□□ 9.1
RPS3P23396 SSBP1-202ENST00000461433 1694 ntTSL 1 (best)11.1□□□□□ -0.632e-8■□□□□ 9.1
RPS3P23396 ZNF207-212ENST00000580759 572 ntTSL 510.26□□□□□ -0.772e-8■□□□□ 9.1
RPS3P23396 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC10.17□□□□□ -0.782e-8■□□□□ 9.1
RPS3P23396 ZNF207-210ENST00000579634 580 ntTSL 39.24□□□□□ -0.932e-8■□□□□ 9.1
RPS3P23396 ZNF207-214ENST00000582165 592 ntTSL 57.9□□□□□ -1.142e-8■□□□□ 9.1
RPS3P23396 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC7.55□□□□□ -1.22e-8■□□□□ 9.1
RPS3P23396 UBE2D2-203ENST00000398734 901 ntTSL 56.99□□□□□ -1.292e-8■□□□□ 9.1
RPS3P23396 SSBP1-213ENST00000496622 2620 ntTSL 1 (best)5.9□□□□□ -1.472e-8■□□□□ 9.1
RPS3P23396 ZNF207-206ENST00000577324 1005 ntTSL 24.79□□□□□ -1.642e-8■□□□□ 9.1
RPS3P23396 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.94□□□□□ -1.782e-8■□□□□ 9.1
RPS3P23396 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.862e-8■□□□□ 9.1
RPS3P23396 ZNF207-205ENST00000394679 847 ntTSL 32.89□□□□□ -1.952e-8■□□□□ 9.1
RPS3P23396 AC005899.4-202ENST00000578389 429 ntTSL 22.36□□□□□ -2.032e-8■□□□□ 9.1
RPS3P23396 ZNF207-208ENST00000578918 580 ntTSL 42.33□□□□□ -2.042e-8■□□□□ 9.1
RPS3P23396 UBE2D2-207ENST00000511691 543 ntTSL 21.07□□□□□ -2.242e-8■□□□□ 9.1
Retrieved 100 of 24,271 protein–RNA pairs in 411.9 ms