Protein–RNA interactions for Protein: Q9WUF1

Vmn1r49, Vomeronasal type-1 receptor 49, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r49Q9WUF1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vmn1r49Q9WUF1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.78■□□□□ 0.92
Vmn1r49Q9WUF1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vmn1r49Q9WUF1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vmn1r49Q9WUF1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vmn1r49Q9WUF1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vmn1r49Q9WUF1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vmn1r49Q9WUF1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vmn1r49Q9WUF1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.76■□□□□ 0.91
Vmn1r49Q9WUF1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.76■□□□□ 0.91
Vmn1r49Q9WUF1 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.76■□□□□ 0.91
Vmn1r49Q9WUF1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Vmn1r49Q9WUF1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vmn1r49Q9WUF1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vmn1r49Q9WUF1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Vmn1r49Q9WUF1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.75■□□□□ 0.91
Vmn1r49Q9WUF1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.75■□□□□ 0.91
Vmn1r49Q9WUF1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vmn1r49Q9WUF1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vmn1r49Q9WUF1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.75■□□□□ 0.91
Vmn1r49Q9WUF1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.75■□□□□ 0.91
Vmn1r49Q9WUF1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmn1r49Q9WUF1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.74■□□□□ 0.91
Vmn1r49Q9WUF1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmn1r49Q9WUF1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vmn1r49Q9WUF1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmn1r49Q9WUF1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r49Q9WUF1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r49Q9WUF1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r49Q9WUF1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r49Q9WUF1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r49Q9WUF1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r49Q9WUF1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r49Q9WUF1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vmn1r49Q9WUF1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.72■□□□□ 0.91
Vmn1r49Q9WUF1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.72■□□□□ 0.91
Vmn1r49Q9WUF1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vmn1r49Q9WUF1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.72■□□□□ 0.91
Vmn1r49Q9WUF1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vmn1r49Q9WUF1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r49Q9WUF1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vmn1r49Q9WUF1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.69■□□□□ 0.9
Vmn1r49Q9WUF1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vmn1r49Q9WUF1 Gm22238-201ENSMUST00000175222 88 ntBASIC20.69■□□□□ 0.9
Vmn1r49Q9WUF1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vmn1r49Q9WUF1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vmn1r49Q9WUF1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vmn1r49Q9WUF1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vmn1r49Q9WUF1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vmn1r49Q9WUF1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vmn1r49Q9WUF1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vmn1r49Q9WUF1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vmn1r49Q9WUF1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vmn1r49Q9WUF1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vmn1r49Q9WUF1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r49Q9WUF1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r49Q9WUF1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r49Q9WUF1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.67■□□□□ 0.9
Vmn1r49Q9WUF1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vmn1r49Q9WUF1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r49Q9WUF1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r49Q9WUF1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r49Q9WUF1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r49Q9WUF1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vmn1r49Q9WUF1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Vmn1r49Q9WUF1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
Vmn1r49Q9WUF1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r49Q9WUF1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r49Q9WUF1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r49Q9WUF1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r49Q9WUF1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Vmn1r49Q9WUF1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r49Q9WUF1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms