Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPUSD1Q9UJJ7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPUSD1Q9UJJ7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 LINC01124-201ENST00000409786 2117 ntBASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 AC093323.1-202ENST00000635031 2045 ntBASIC19.17■□□□□ 0.66
RPUSD1Q9UJJ7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPUSD1Q9UJJ7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RPUSD1Q9UJJ7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPUSD1Q9UJJ7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPUSD1Q9UJJ7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
RPUSD1Q9UJJ7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.16■□□□□ 0.66
RPUSD1Q9UJJ7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPUSD1Q9UJJ7 AC092028.1-203ENST00000608262 953 ntBASIC19.16■□□□□ 0.66
RPUSD1Q9UJJ7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPUSD1Q9UJJ7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPUSD1Q9UJJ7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPUSD1Q9UJJ7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPUSD1Q9UJJ7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.15■□□□□ 0.66
RPUSD1Q9UJJ7 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.15■□□□□ 0.66
RPUSD1Q9UJJ7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.15■□□□□ 0.66
RPUSD1Q9UJJ7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.15■□□□□ 0.66
RPUSD1Q9UJJ7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPUSD1Q9UJJ7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPUSD1Q9UJJ7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPUSD1Q9UJJ7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RPUSD1Q9UJJ7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPUSD1Q9UJJ7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPUSD1Q9UJJ7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPUSD1Q9UJJ7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.14■□□□□ 0.65
RPUSD1Q9UJJ7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.14■□□□□ 0.65
RPUSD1Q9UJJ7 AC141586.4-201ENST00000624558 1573 ntBASIC19.14■□□□□ 0.65
RPUSD1Q9UJJ7 HLA-L-211ENST00000482052 1765 ntBASIC19.14■□□□□ 0.65
RPUSD1Q9UJJ7 LINC00543-201ENST00000567234 1845 ntBASIC19.14■□□□□ 0.65
RPUSD1Q9UJJ7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPUSD1Q9UJJ7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RPUSD1Q9UJJ7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
RPUSD1Q9UJJ7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RPUSD1Q9UJJ7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.13■□□□□ 0.65
RPUSD1Q9UJJ7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.13■□□□□ 0.65
RPUSD1Q9UJJ7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPUSD1Q9UJJ7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPUSD1Q9UJJ7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPUSD1Q9UJJ7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 TSPY9P-201ENST00000440215 945 ntBASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 TSPY11P-201ENST00000442607 1045 ntBASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPUSD1Q9UJJ7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPUSD1Q9UJJ7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPUSD1Q9UJJ7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RPUSD1Q9UJJ7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.11■□□□□ 0.65
RPUSD1Q9UJJ7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.11■□□□□ 0.65
RPUSD1Q9UJJ7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.11■□□□□ 0.65
RPUSD1Q9UJJ7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
RPUSD1Q9UJJ7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 UNC93B8-201ENST00000511903 705 ntBASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RPUSD1Q9UJJ7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms