Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
Lsm7Q9CQQ8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm7Q9CQQ8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.04■□□□□ 0.96
Lsm7Q9CQQ8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm7Q9CQQ8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm7Q9CQQ8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm7Q9CQQ8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm7Q9CQQ8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm7Q9CQQ8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm7Q9CQQ8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Lsm7Q9CQQ8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm7Q9CQQ8 Gm15039-201ENSMUST00000118914 875 ntBASIC21.03■□□□□ 0.96
Lsm7Q9CQQ8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.03■□□□□ 0.96
Lsm7Q9CQQ8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm7Q9CQQ8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm7Q9CQQ8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm7Q9CQQ8 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.02■□□□□ 0.96
Lsm7Q9CQQ8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm7Q9CQQ8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Lsm7Q9CQQ8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.02■□□□□ 0.96
Lsm7Q9CQQ8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm7Q9CQQ8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm7Q9CQQ8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Lsm7Q9CQQ8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.02■□□□□ 0.96
Lsm7Q9CQQ8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lsm7Q9CQQ8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lsm7Q9CQQ8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lsm7Q9CQQ8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm7Q9CQQ8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm7Q9CQQ8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm7Q9CQQ8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lsm7Q9CQQ8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.01■□□□□ 0.95
Lsm7Q9CQQ8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lsm7Q9CQQ8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Lsm7Q9CQQ8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21■□□□□ 0.95
Lsm7Q9CQQ8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm7Q9CQQ8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21■□□□□ 0.95
Lsm7Q9CQQ8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21■□□□□ 0.95
Lsm7Q9CQQ8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21■□□□□ 0.95
Lsm7Q9CQQ8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21■□□□□ 0.95
Lsm7Q9CQQ8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm7Q9CQQ8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Lsm7Q9CQQ8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm7Q9CQQ8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.99■□□□□ 0.95
Lsm7Q9CQQ8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsm7Q9CQQ8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Lsm7Q9CQQ8 Golgb1-201ENSMUST00000023534 498 ntBASIC20.99■□□□□ 0.95
Lsm7Q9CQQ8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lsm7Q9CQQ8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lsm7Q9CQQ8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsm7Q9CQQ8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsm7Q9CQQ8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Gm9870-201ENSMUST00000063874 645 ntBASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Lsm7Q9CQQ8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm7Q9CQQ8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm7Q9CQQ8 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.97■□□□□ 0.95
Lsm7Q9CQQ8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm7Q9CQQ8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Lsm7Q9CQQ8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.97■□□□□ 0.95
Lsm7Q9CQQ8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm7Q9CQQ8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm7Q9CQQ8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm7Q9CQQ8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Lsm7Q9CQQ8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm7Q9CQQ8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Lsm7Q9CQQ8 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.96■□□□□ 0.95
Lsm7Q9CQQ8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm7Q9CQQ8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm7Q9CQQ8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Lsm7Q9CQQ8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm7Q9CQQ8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm7Q9CQQ8 Gm21956-201ENSMUST00000179946 522 ntBASIC20.95■□□□□ 0.94
Lsm7Q9CQQ8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.95■□□□□ 0.94
Lsm7Q9CQQ8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm7Q9CQQ8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm7Q9CQQ8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm7Q9CQQ8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm7Q9CQQ8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm7Q9CQQ8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.95■□□□□ 0.94
Lsm7Q9CQQ8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm7Q9CQQ8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm7Q9CQQ8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm7Q9CQQ8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm7Q9CQQ8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.94■□□□□ 0.94
Lsm7Q9CQQ8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.94■□□□□ 0.94
Lsm7Q9CQQ8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lsm7Q9CQQ8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lsm7Q9CQQ8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm7Q9CQQ8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm7Q9CQQ8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm7Q9CQQ8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms