Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Raf1Q99N57 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raf1Q99N57 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Raf1Q99N57 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Raf1Q99N57 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raf1Q99N57 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Raf1Q99N57 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raf1Q99N57 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raf1Q99N57 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raf1Q99N57 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raf1Q99N57 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raf1Q99N57 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Raf1Q99N57 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raf1Q99N57 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Raf1Q99N57 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Raf1Q99N57 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Raf1Q99N57 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raf1Q99N57 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raf1Q99N57 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raf1Q99N57 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Raf1Q99N57 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Raf1Q99N57 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raf1Q99N57 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Raf1Q99N57 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raf1Q99N57 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Raf1Q99N57 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raf1Q99N57 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.49■□□□□ 0.55
Raf1Q99N57 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raf1Q99N57 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raf1Q99N57 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Raf1Q99N57 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raf1Q99N57 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raf1Q99N57 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Raf1Q99N57 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.48■□□□□ 0.55
Raf1Q99N57 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.48■□□□□ 0.55
Raf1Q99N57 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.48■□□□□ 0.55
Raf1Q99N57 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.48■□□□□ 0.55
Raf1Q99N57 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raf1Q99N57 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raf1Q99N57 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raf1Q99N57 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raf1Q99N57 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raf1Q99N57 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Raf1Q99N57 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Raf1Q99N57 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raf1Q99N57 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Raf1Q99N57 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.47■□□□□ 0.55
Raf1Q99N57 Gm15820-201ENSMUST00000201566 728 ntBASIC18.47■□□□□ 0.55
Raf1Q99N57 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.47■□□□□ 0.55
Raf1Q99N57 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raf1Q99N57 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raf1Q99N57 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Raf1Q99N57 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raf1Q99N57 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Raf1Q99N57 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.46■□□□□ 0.55
Raf1Q99N57 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Raf1Q99N57 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.46■□□□□ 0.55
Raf1Q99N57 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raf1Q99N57 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raf1Q99N57 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Raf1Q99N57 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raf1Q99N57 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Raf1Q99N57 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raf1Q99N57 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raf1Q99N57 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raf1Q99N57 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raf1Q99N57 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raf1Q99N57 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raf1Q99N57 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Raf1Q99N57 Rps24-207ENSMUST00000224568 714 ntBASIC18.45■□□□□ 0.54
Raf1Q99N57 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raf1Q99N57 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raf1Q99N57 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raf1Q99N57 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Raf1Q99N57 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raf1Q99N57 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Raf1Q99N57 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raf1Q99N57 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raf1Q99N57 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raf1Q99N57 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raf1Q99N57 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raf1Q99N57 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raf1Q99N57 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Raf1Q99N57 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Raf1Q99N57 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.44■□□□□ 0.54
Raf1Q99N57 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raf1Q99N57 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.43■□□□□ 0.54
Raf1Q99N57 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.43■□□□□ 0.54
Raf1Q99N57 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Raf1Q99N57 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.43■□□□□ 0.54
Raf1Q99N57 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raf1Q99N57 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Raf1Q99N57 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Raf1Q99N57 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raf1Q99N57 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Raf1Q99N57 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms