Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.21■□□□□ 0.51
Scrt1Q99M85 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.2■□□□□ 0.5
Scrt1Q99M85 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Scrt1Q99M85 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.2■□□□□ 0.5
Scrt1Q99M85 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scrt1Q99M85 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scrt1Q99M85 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.19■□□□□ 0.5
Scrt1Q99M85 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scrt1Q99M85 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scrt1Q99M85 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scrt1Q99M85 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.19■□□□□ 0.5
Scrt1Q99M85 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scrt1Q99M85 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.19■□□□□ 0.5
Scrt1Q99M85 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scrt1Q99M85 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scrt1Q99M85 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scrt1Q99M85 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.18■□□□□ 0.5
Scrt1Q99M85 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scrt1Q99M85 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Scrt1Q99M85 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scrt1Q99M85 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.17■□□□□ 0.5
Scrt1Q99M85 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Scrt1Q99M85 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Scrt1Q99M85 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.17■□□□□ 0.5
Scrt1Q99M85 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.17■□□□□ 0.5
Scrt1Q99M85 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scrt1Q99M85 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scrt1Q99M85 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scrt1Q99M85 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.17■□□□□ 0.5
Scrt1Q99M85 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Scrt1Q99M85 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scrt1Q99M85 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scrt1Q99M85 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scrt1Q99M85 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scrt1Q99M85 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scrt1Q99M85 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scrt1Q99M85 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scrt1Q99M85 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scrt1Q99M85 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scrt1Q99M85 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scrt1Q99M85 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scrt1Q99M85 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Scrt1Q99M85 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.15■□□□□ 0.5
Scrt1Q99M85 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scrt1Q99M85 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scrt1Q99M85 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scrt1Q99M85 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scrt1Q99M85 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scrt1Q99M85 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scrt1Q99M85 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.14■□□□□ 0.49
Scrt1Q99M85 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scrt1Q99M85 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scrt1Q99M85 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.14■□□□□ 0.49
Scrt1Q99M85 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scrt1Q99M85 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.14■□□□□ 0.49
Scrt1Q99M85 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scrt1Q99M85 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scrt1Q99M85 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scrt1Q99M85 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.13■□□□□ 0.49
Scrt1Q99M85 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.13■□□□□ 0.49
Scrt1Q99M85 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Scrt1Q99M85 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.13■□□□□ 0.49
Scrt1Q99M85 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Scrt1Q99M85 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.13■□□□□ 0.49
Scrt1Q99M85 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scrt1Q99M85 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.13■□□□□ 0.49
Scrt1Q99M85 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scrt1Q99M85 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Scrt1Q99M85 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scrt1Q99M85 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scrt1Q99M85 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.12■□□□□ 0.49
Scrt1Q99M85 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Scrt1Q99M85 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scrt1Q99M85 Gm6139-201ENSMUST00000079261 882 ntBASIC18.12■□□□□ 0.49
Scrt1Q99M85 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scrt1Q99M85 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scrt1Q99M85 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scrt1Q99M85 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scrt1Q99M85 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scrt1Q99M85 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scrt1Q99M85 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scrt1Q99M85 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Scrt1Q99M85 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scrt1Q99M85 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms