Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPRD1AQ96P16 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.85■■□□□ 1.41
RPRD1AQ96P16 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.84■■□□□ 1.41
RPRD1AQ96P16 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.84■■□□□ 1.41
RPRD1AQ96P16 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.84■■□□□ 1.41
RPRD1AQ96P16 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPRD1AQ96P16 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPRD1AQ96P16 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPRD1AQ96P16 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPRD1AQ96P16 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPRD1AQ96P16 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RPRD1AQ96P16 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.83■■□□□ 1.41
RPRD1AQ96P16 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.83■■□□□ 1.41
RPRD1AQ96P16 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.83■■□□□ 1.41
RPRD1AQ96P16 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.83■■□□□ 1.41
RPRD1AQ96P16 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.83■■□□□ 1.41
RPRD1AQ96P16 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RPRD1AQ96P16 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.82■■□□□ 1.4
RPRD1AQ96P16 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPRD1AQ96P16 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
RPRD1AQ96P16 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.82■■□□□ 1.4
RPRD1AQ96P16 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPRD1AQ96P16 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RPRD1AQ96P16 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPRD1AQ96P16 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPRD1AQ96P16 AL356441.2-201ENST00000443009 864 ntBASIC23.81■■□□□ 1.4
RPRD1AQ96P16 MTDHP2-201ENST00000601468 714 ntBASIC23.81■■□□□ 1.4
RPRD1AQ96P16 SNX5-217ENST00000606557 1087 ntBASIC23.81■■□□□ 1.4
RPRD1AQ96P16 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RPRD1AQ96P16 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RPRD1AQ96P16 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.81■■□□□ 1.4
RPRD1AQ96P16 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RPRD1AQ96P16 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPRD1AQ96P16 AC135731.1-201ENST00000569415 2548 ntBASIC23.81■■□□□ 1.4
RPRD1AQ96P16 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RPRD1AQ96P16 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPRD1AQ96P16 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPRD1AQ96P16 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RPRD1AQ96P16 KRT16P3-201ENST00000439127 1283 ntBASIC23.8■■□□□ 1.4
RPRD1AQ96P16 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.8■■□□□ 1.4
RPRD1AQ96P16 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.8■■□□□ 1.4
RPRD1AQ96P16 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.8■■□□□ 1.4
RPRD1AQ96P16 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.8■■□□□ 1.4
RPRD1AQ96P16 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.8■■□□□ 1.4
RPRD1AQ96P16 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.8■■□□□ 1.4
RPRD1AQ96P16 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.8■■□□□ 1.4
RPRD1AQ96P16 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.8■■□□□ 1.4
RPRD1AQ96P16 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 AC131274.2-201ENST00000580697 1507 ntBASIC23.79■■□□□ 1.4
RPRD1AQ96P16 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPRD1AQ96P16 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RPRD1AQ96P16 AL022069.1-201ENST00000568025 1636 ntBASIC23.78■■□□□ 1.4
RPRD1AQ96P16 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.78■■□□□ 1.4
RPRD1AQ96P16 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.78■■□□□ 1.4
RPRD1AQ96P16 AC010997.5-201ENST00000609182 354 ntBASIC23.78■■□□□ 1.4
RPRD1AQ96P16 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.78■■□□□ 1.4
RPRD1AQ96P16 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RPRD1AQ96P16 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RPRD1AQ96P16 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.78■■□□□ 1.4
RPRD1AQ96P16 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RPRD1AQ96P16 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPRD1AQ96P16 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPRD1AQ96P16 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.77■■□□□ 1.4
RPRD1AQ96P16 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.77■■□□□ 1.4
RPRD1AQ96P16 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
RPRD1AQ96P16 AC004448.1-201ENST00000458332 883 ntBASIC23.77■■□□□ 1.4
RPRD1AQ96P16 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.77■■□□□ 1.4
RPRD1AQ96P16 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPRD1AQ96P16 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPRD1AQ96P16 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.77■■□□□ 1.4
RPRD1AQ96P16 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPRD1AQ96P16 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPRD1AQ96P16 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RPRD1AQ96P16 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RPRD1AQ96P16 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.75■■□□□ 1.39
RPRD1AQ96P16 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RPRD1AQ96P16 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
RPRD1AQ96P16 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.75■■□□□ 1.39
RPRD1AQ96P16 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPRD1AQ96P16 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.74■■□□□ 1.39
RPRD1AQ96P16 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPRD1AQ96P16 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.74■■□□□ 1.39
RPRD1AQ96P16 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RPRD1AQ96P16 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RPRD1AQ96P16 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RPRD1AQ96P16 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RPRD1AQ96P16 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RPRD1AQ96P16 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.73■■□□□ 1.39
RPRD1AQ96P16 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms