Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col20a1Q923P0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Col20a1Q923P0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Col20a1Q923P0 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.73■■□□□ 1.55
Col20a1Q923P0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
Col20a1Q923P0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Col20a1Q923P0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col20a1Q923P0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Col20a1Q923P0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col20a1Q923P0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.72■■□□□ 1.55
Col20a1Q923P0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Col20a1Q923P0 Gm7143-201ENSMUST00000222811 859 ntBASIC24.72■■□□□ 1.55
Col20a1Q923P0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Col20a1Q923P0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Col20a1Q923P0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col20a1Q923P0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.71■■□□□ 1.55
Col20a1Q923P0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Col20a1Q923P0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col20a1Q923P0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col20a1Q923P0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC24.71■■□□□ 1.55
Col20a1Q923P0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Col20a1Q923P0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
Col20a1Q923P0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Col20a1Q923P0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Col20a1Q923P0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.69■■□□□ 1.54
Col20a1Q923P0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Col20a1Q923P0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Col20a1Q923P0 Gm27454-201ENSMUST00000185090 204 ntBASIC24.69■■□□□ 1.54
Col20a1Q923P0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col20a1Q923P0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col20a1Q923P0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col20a1Q923P0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col20a1Q923P0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Col20a1Q923P0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Col20a1Q923P0 Gm9207-201ENSMUST00000198773 1115 ntBASIC24.68■■□□□ 1.54
Col20a1Q923P0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col20a1Q923P0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col20a1Q923P0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Col20a1Q923P0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col20a1Q923P0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.67■■□□□ 1.54
Col20a1Q923P0 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.67■■□□□ 1.54
Col20a1Q923P0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col20a1Q923P0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col20a1Q923P0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col20a1Q923P0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col20a1Q923P0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.67■■□□□ 1.54
Col20a1Q923P0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Col20a1Q923P0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col20a1Q923P0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col20a1Q923P0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col20a1Q923P0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Col20a1Q923P0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Col20a1Q923P0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col20a1Q923P0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Col20a1Q923P0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Col20a1Q923P0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Col20a1Q923P0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Col20a1Q923P0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col20a1Q923P0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col20a1Q923P0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.65■■□□□ 1.54
Col20a1Q923P0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Col20a1Q923P0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Col20a1Q923P0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.64■■□□□ 1.54
Col20a1Q923P0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC24.64■■□□□ 1.54
Col20a1Q923P0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Col20a1Q923P0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Col20a1Q923P0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Col20a1Q923P0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Col20a1Q923P0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Col20a1Q923P0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col20a1Q923P0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col20a1Q923P0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col20a1Q923P0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col20a1Q923P0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col20a1Q923P0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col20a1Q923P0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col20a1Q923P0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col20a1Q923P0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col20a1Q923P0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Col20a1Q923P0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col20a1Q923P0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col20a1Q923P0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.61■■□□□ 1.53
Col20a1Q923P0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Col20a1Q923P0 Gm45417-201ENSMUST00000209533 758 ntBASIC24.61■■□□□ 1.53
Col20a1Q923P0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
Col20a1Q923P0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col20a1Q923P0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col20a1Q923P0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col20a1Q923P0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC24.6■■□□□ 1.53
Col20a1Q923P0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col20a1Q923P0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col20a1Q923P0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col20a1Q923P0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col20a1Q923P0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Col20a1Q923P0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Col20a1Q923P0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Col20a1Q923P0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.58■■□□□ 1.53
Col20a1Q923P0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Col20a1Q923P0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Col20a1Q923P0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms