Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H1fooQ8VIK3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H1fooQ8VIK3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
H1fooQ8VIK3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
H1fooQ8VIK3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H1fooQ8VIK3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.36■□□□□ 0.37
H1fooQ8VIK3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H1fooQ8VIK3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H1fooQ8VIK3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H1fooQ8VIK3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H1fooQ8VIK3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H1fooQ8VIK3 Gm45444-201ENSMUST00000211394 898 ntBASIC17.35■□□□□ 0.37
H1fooQ8VIK3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
H1fooQ8VIK3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H1fooQ8VIK3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H1fooQ8VIK3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H1fooQ8VIK3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
H1fooQ8VIK3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H1fooQ8VIK3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
H1fooQ8VIK3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.33■□□□□ 0.36
H1fooQ8VIK3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
H1fooQ8VIK3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.33■□□□□ 0.36
H1fooQ8VIK3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H1fooQ8VIK3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H1fooQ8VIK3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.33■□□□□ 0.36
H1fooQ8VIK3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H1fooQ8VIK3 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.32■□□□□ 0.36
H1fooQ8VIK3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
H1fooQ8VIK3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
H1fooQ8VIK3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.32■□□□□ 0.36
H1fooQ8VIK3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H1fooQ8VIK3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H1fooQ8VIK3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H1fooQ8VIK3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
H1fooQ8VIK3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H1fooQ8VIK3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H1fooQ8VIK3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H1fooQ8VIK3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
H1fooQ8VIK3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.3■□□□□ 0.36
H1fooQ8VIK3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H1fooQ8VIK3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.3■□□□□ 0.36
H1fooQ8VIK3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
H1fooQ8VIK3 Gm5921-201ENSMUST00000075898 882 ntBASIC17.3■□□□□ 0.36
H1fooQ8VIK3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H1fooQ8VIK3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H1fooQ8VIK3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H1fooQ8VIK3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H1fooQ8VIK3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
H1fooQ8VIK3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms