Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpa1Q8VEE4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpa1Q8VEE4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpa1Q8VEE4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.83■□□□□ 0.93
Rpa1Q8VEE4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpa1Q8VEE4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpa1Q8VEE4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpa1Q8VEE4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpa1Q8VEE4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpa1Q8VEE4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Rpa1Q8VEE4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Rpa1Q8VEE4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpa1Q8VEE4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rpa1Q8VEE4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpa1Q8VEE4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpa1Q8VEE4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpa1Q8VEE4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rpa1Q8VEE4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpa1Q8VEE4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rpa1Q8VEE4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpa1Q8VEE4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpa1Q8VEE4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpa1Q8VEE4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpa1Q8VEE4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rpa1Q8VEE4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.81■□□□□ 0.92
Rpa1Q8VEE4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpa1Q8VEE4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpa1Q8VEE4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpa1Q8VEE4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpa1Q8VEE4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpa1Q8VEE4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpa1Q8VEE4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpa1Q8VEE4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.79■□□□□ 0.92
Rpa1Q8VEE4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Rpa1Q8VEE4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rpa1Q8VEE4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Rpa1Q8VEE4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpa1Q8VEE4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rpa1Q8VEE4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rpa1Q8VEE4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpa1Q8VEE4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpa1Q8VEE4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rpa1Q8VEE4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpa1Q8VEE4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpa1Q8VEE4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rpa1Q8VEE4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpa1Q8VEE4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpa1Q8VEE4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpa1Q8VEE4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpa1Q8VEE4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.77■□□□□ 0.92
Rpa1Q8VEE4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpa1Q8VEE4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpa1Q8VEE4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rpa1Q8VEE4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpa1Q8VEE4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpa1Q8VEE4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
Rpa1Q8VEE4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpa1Q8VEE4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rpa1Q8VEE4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.76■□□□□ 0.91
Rpa1Q8VEE4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpa1Q8VEE4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpa1Q8VEE4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.76■□□□□ 0.91
Rpa1Q8VEE4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpa1Q8VEE4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpa1Q8VEE4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rpa1Q8VEE4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpa1Q8VEE4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpa1Q8VEE4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Rpa1Q8VEE4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.74■□□□□ 0.91
Rpa1Q8VEE4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpa1Q8VEE4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpa1Q8VEE4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpa1Q8VEE4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rpa1Q8VEE4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpa1Q8VEE4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpa1Q8VEE4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 180.9 ms