Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Q8VDP2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Q8VDP2 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.13■□□□□ 0.81
Q8VDP2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Q8VDP2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.13■□□□□ 0.81
Q8VDP2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.12■□□□□ 0.81
Q8VDP2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q8VDP2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q8VDP2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Q8VDP2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.12■□□□□ 0.81
Q8VDP2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q8VDP2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q8VDP2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Q8VDP2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Q8VDP2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8VDP2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8VDP2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8VDP2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Q8VDP2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8VDP2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Q8VDP2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8VDP2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8VDP2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.1■□□□□ 0.81
Q8VDP2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8VDP2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q8VDP2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q8VDP2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Q8VDP2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q8VDP2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Q8VDP2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Q8VDP2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.09■□□□□ 0.81
Q8VDP2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Q8VDP2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q8VDP2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q8VDP2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Q8VDP2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q8VDP2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q8VDP2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q8VDP2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q8VDP2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q8VDP2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.08■□□□□ 0.81
Q8VDP2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Q8VDP2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Q8VDP2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Q8VDP2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q8VDP2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q8VDP2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.07■□□□□ 0.8
Q8VDP2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q8VDP2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8VDP2 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.06■□□□□ 0.8
Q8VDP2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8VDP2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Q8VDP2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8VDP2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8VDP2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8VDP2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8VDP2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Q8VDP2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.06■□□□□ 0.8
Q8VDP2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8VDP2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8VDP2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8VDP2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.05■□□□□ 0.8
Q8VDP2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q8VDP2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q8VDP2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Q8VDP2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Q8VDP2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Q8VDP2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Q8VDP2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q8VDP2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q8VDP2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q8VDP2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Q8VDP2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q8VDP2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q8VDP2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Q8VDP2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q8VDP2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q8VDP2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q8VDP2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8VDP2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8VDP2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.03■□□□□ 0.8
Q8VDP2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Q8VDP2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8VDP2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8VDP2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Q8VDP2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8VDP2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8VDP2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.03■□□□□ 0.8
Q8VDP2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms