Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.22■□□□□ 0.67
H2afjQ8R1M2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H2afjQ8R1M2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.22■□□□□ 0.67
H2afjQ8R1M2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.22■□□□□ 0.67
H2afjQ8R1M2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afjQ8R1M2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afjQ8R1M2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afjQ8R1M2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H2afjQ8R1M2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.21■□□□□ 0.67
H2afjQ8R1M2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afjQ8R1M2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.21■□□□□ 0.67
H2afjQ8R1M2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afjQ8R1M2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afjQ8R1M2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afjQ8R1M2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afjQ8R1M2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.2■□□□□ 0.66
H2afjQ8R1M2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afjQ8R1M2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.2■□□□□ 0.66
H2afjQ8R1M2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.2■□□□□ 0.66
H2afjQ8R1M2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H2afjQ8R1M2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afjQ8R1M2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afjQ8R1M2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afjQ8R1M2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afjQ8R1M2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.19■□□□□ 0.66
H2afjQ8R1M2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.19■□□□□ 0.66
H2afjQ8R1M2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afjQ8R1M2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H2afjQ8R1M2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afjQ8R1M2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afjQ8R1M2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afjQ8R1M2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H2afjQ8R1M2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.19■□□□□ 0.66
H2afjQ8R1M2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
H2afjQ8R1M2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afjQ8R1M2 Gm10420-201ENSMUST00000121713 882 ntBASIC19.18■□□□□ 0.66
H2afjQ8R1M2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
H2afjQ8R1M2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
H2afjQ8R1M2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
H2afjQ8R1M2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afjQ8R1M2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afjQ8R1M2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afjQ8R1M2 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.17■□□□□ 0.66
H2afjQ8R1M2 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.17■□□□□ 0.66
H2afjQ8R1M2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afjQ8R1M2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afjQ8R1M2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2afjQ8R1M2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afjQ8R1M2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afjQ8R1M2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afjQ8R1M2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.16■□□□□ 0.66
H2afjQ8R1M2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afjQ8R1M2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afjQ8R1M2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
H2afjQ8R1M2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afjQ8R1M2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afjQ8R1M2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
H2afjQ8R1M2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afjQ8R1M2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
H2afjQ8R1M2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
H2afjQ8R1M2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afjQ8R1M2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afjQ8R1M2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
H2afjQ8R1M2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afjQ8R1M2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.14■□□□□ 0.65
H2afjQ8R1M2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
H2afjQ8R1M2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afjQ8R1M2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afjQ8R1M2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.14■□□□□ 0.65
H2afjQ8R1M2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afjQ8R1M2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
H2afjQ8R1M2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
H2afjQ8R1M2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afjQ8R1M2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
H2afjQ8R1M2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afjQ8R1M2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
H2afjQ8R1M2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.13■□□□□ 0.65
H2afjQ8R1M2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afjQ8R1M2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afjQ8R1M2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afjQ8R1M2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afjQ8R1M2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afjQ8R1M2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afjQ8R1M2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afjQ8R1M2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afjQ8R1M2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
H2afjQ8R1M2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afjQ8R1M2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
H2afjQ8R1M2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afjQ8R1M2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afjQ8R1M2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H2afjQ8R1M2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
H2afjQ8R1M2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afjQ8R1M2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afjQ8R1M2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afjQ8R1M2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afjQ8R1M2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afjQ8R1M2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afjQ8R1M2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
H2afjQ8R1M2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms