Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRT78Q8N1N4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
KRT78Q8N1N4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.26■■□□□ 1.15
KRT78Q8N1N4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT78Q8N1N4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT78Q8N1N4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
KRT78Q8N1N4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.26■■□□□ 1.15
KRT78Q8N1N4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRT78Q8N1N4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KRT78Q8N1N4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KRT78Q8N1N4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.25■■□□□ 1.15
KRT78Q8N1N4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KRT78Q8N1N4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.24■■□□□ 1.15
KRT78Q8N1N4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
KRT78Q8N1N4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
KRT78Q8N1N4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
KRT78Q8N1N4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KRT78Q8N1N4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
KRT78Q8N1N4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRT78Q8N1N4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
KRT78Q8N1N4 AC103724.3-201ENST00000564481 992 ntBASIC22.22■■□□□ 1.15
KRT78Q8N1N4 MIR4281-201ENST00000580852 62 ntBASIC22.22■■□□□ 1.15
KRT78Q8N1N4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
KRT78Q8N1N4 AL161729.1-201ENST00000604104 1402 ntBASIC22.22■■□□□ 1.15
KRT78Q8N1N4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.22■■□□□ 1.15
KRT78Q8N1N4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
KRT78Q8N1N4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
KRT78Q8N1N4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
KRT78Q8N1N4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
KRT78Q8N1N4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.21■■□□□ 1.15
KRT78Q8N1N4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.21■■□□□ 1.15
KRT78Q8N1N4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.21■■□□□ 1.15
KRT78Q8N1N4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
KRT78Q8N1N4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
KRT78Q8N1N4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
KRT78Q8N1N4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
KRT78Q8N1N4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.2■■□□□ 1.14
KRT78Q8N1N4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.2■■□□□ 1.14
KRT78Q8N1N4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
KRT78Q8N1N4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
KRT78Q8N1N4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
KRT78Q8N1N4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
KRT78Q8N1N4 AL031848.2-201ENST00000607670 837 ntBASIC22.19■■□□□ 1.14
KRT78Q8N1N4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
KRT78Q8N1N4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
KRT78Q8N1N4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
KRT78Q8N1N4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
KRT78Q8N1N4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.19■■□□□ 1.14
KRT78Q8N1N4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
KRT78Q8N1N4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.18■■□□□ 1.14
KRT78Q8N1N4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KRT78Q8N1N4 AL022069.1-201ENST00000568025 1636 ntBASIC22.18■■□□□ 1.14
KRT78Q8N1N4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
KRT78Q8N1N4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.18■■□□□ 1.14
KRT78Q8N1N4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.18■■□□□ 1.14
KRT78Q8N1N4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRT78Q8N1N4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRT78Q8N1N4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRT78Q8N1N4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.17■■□□□ 1.14
KRT78Q8N1N4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.17■■□□□ 1.14
KRT78Q8N1N4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.17■■□□□ 1.14
KRT78Q8N1N4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
KRT78Q8N1N4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.17■■□□□ 1.14
KRT78Q8N1N4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
KRT78Q8N1N4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.17■■□□□ 1.14
KRT78Q8N1N4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.16■■□□□ 1.14
KRT78Q8N1N4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.16■■□□□ 1.14
KRT78Q8N1N4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
KRT78Q8N1N4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KRT78Q8N1N4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
KRT78Q8N1N4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.16■■□□□ 1.14
KRT78Q8N1N4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.16■■□□□ 1.14
KRT78Q8N1N4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KRT78Q8N1N4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
KRT78Q8N1N4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KRT78Q8N1N4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.15■■□□□ 1.14
KRT78Q8N1N4 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.15■■□□□ 1.14
KRT78Q8N1N4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KRT78Q8N1N4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.15■■□□□ 1.14
KRT78Q8N1N4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KRT78Q8N1N4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
KRT78Q8N1N4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.14■■□□□ 1.14
KRT78Q8N1N4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
KRT78Q8N1N4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
KRT78Q8N1N4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
KRT78Q8N1N4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.14■■□□□ 1.13
KRT78Q8N1N4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KRT78Q8N1N4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms