Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
Trnt1Q8K1J6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trnt1Q8K1J6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trnt1Q8K1J6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trnt1Q8K1J6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trnt1Q8K1J6 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.14■□□□□ 0.81
Trnt1Q8K1J6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trnt1Q8K1J6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.14■□□□□ 0.81
Trnt1Q8K1J6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trnt1Q8K1J6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trnt1Q8K1J6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trnt1Q8K1J6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.13■□□□□ 0.81
Trnt1Q8K1J6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trnt1Q8K1J6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.13■□□□□ 0.81
Trnt1Q8K1J6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.13■□□□□ 0.81
Trnt1Q8K1J6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trnt1Q8K1J6 Gm10232-201ENSMUST00000089221 720 ntBASIC20.13■□□□□ 0.81
Trnt1Q8K1J6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.13■□□□□ 0.81
Trnt1Q8K1J6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trnt1Q8K1J6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnt1Q8K1J6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trnt1Q8K1J6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.11■□□□□ 0.81
Trnt1Q8K1J6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trnt1Q8K1J6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trnt1Q8K1J6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.11■□□□□ 0.81
Trnt1Q8K1J6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trnt1Q8K1J6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trnt1Q8K1J6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trnt1Q8K1J6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trnt1Q8K1J6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.1■□□□□ 0.81
Trnt1Q8K1J6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Trnt1Q8K1J6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trnt1Q8K1J6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Trnt1Q8K1J6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trnt1Q8K1J6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trnt1Q8K1J6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trnt1Q8K1J6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trnt1Q8K1J6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trnt1Q8K1J6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trnt1Q8K1J6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trnt1Q8K1J6 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.08■□□□□ 0.81
Trnt1Q8K1J6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trnt1Q8K1J6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trnt1Q8K1J6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trnt1Q8K1J6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trnt1Q8K1J6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trnt1Q8K1J6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trnt1Q8K1J6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trnt1Q8K1J6 Gm10399-202ENSMUST00000202768 748 ntBASIC20.07■□□□□ 0.8
Trnt1Q8K1J6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Trnt1Q8K1J6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trnt1Q8K1J6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trnt1Q8K1J6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trnt1Q8K1J6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trnt1Q8K1J6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trnt1Q8K1J6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnt1Q8K1J6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnt1Q8K1J6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnt1Q8K1J6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trnt1Q8K1J6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trnt1Q8K1J6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnt1Q8K1J6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnt1Q8K1J6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnt1Q8K1J6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnt1Q8K1J6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnt1Q8K1J6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnt1Q8K1J6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnt1Q8K1J6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trnt1Q8K1J6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnt1Q8K1J6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnt1Q8K1J6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trnt1Q8K1J6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnt1Q8K1J6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trnt1Q8K1J6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trnt1Q8K1J6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trnt1Q8K1J6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trnt1Q8K1J6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms