Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PdgfcQ8CI19 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PdgfcQ8CI19 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.17■■□□□ 1.3
PdgfcQ8CI19 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
PdgfcQ8CI19 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.17■■□□□ 1.3
PdgfcQ8CI19 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PdgfcQ8CI19 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PdgfcQ8CI19 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PdgfcQ8CI19 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PdgfcQ8CI19 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PdgfcQ8CI19 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.16■■□□□ 1.3
PdgfcQ8CI19 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PdgfcQ8CI19 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PdgfcQ8CI19 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PdgfcQ8CI19 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PdgfcQ8CI19 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PdgfcQ8CI19 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PdgfcQ8CI19 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
PdgfcQ8CI19 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.14■■□□□ 1.29
PdgfcQ8CI19 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PdgfcQ8CI19 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PdgfcQ8CI19 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.13■■□□□ 1.29
PdgfcQ8CI19 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PdgfcQ8CI19 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PdgfcQ8CI19 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PdgfcQ8CI19 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PdgfcQ8CI19 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PdgfcQ8CI19 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PdgfcQ8CI19 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PdgfcQ8CI19 Gm7143-201ENSMUST00000222811 859 ntBASIC23.12■■□□□ 1.29
PdgfcQ8CI19 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PdgfcQ8CI19 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PdgfcQ8CI19 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PdgfcQ8CI19 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PdgfcQ8CI19 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
PdgfcQ8CI19 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PdgfcQ8CI19 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PdgfcQ8CI19 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PdgfcQ8CI19 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
PdgfcQ8CI19 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PdgfcQ8CI19 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PdgfcQ8CI19 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PdgfcQ8CI19 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PdgfcQ8CI19 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.1■■□□□ 1.29
PdgfcQ8CI19 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PdgfcQ8CI19 Gm8493-201ENSMUST00000196881 489 ntBASIC23.1■■□□□ 1.29
PdgfcQ8CI19 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PdgfcQ8CI19 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PdgfcQ8CI19 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PdgfcQ8CI19 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PdgfcQ8CI19 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PdgfcQ8CI19 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PdgfcQ8CI19 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PdgfcQ8CI19 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PdgfcQ8CI19 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.08■■□□□ 1.29
PdgfcQ8CI19 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PdgfcQ8CI19 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PdgfcQ8CI19 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PdgfcQ8CI19 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.07■■□□□ 1.28
PdgfcQ8CI19 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PdgfcQ8CI19 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PdgfcQ8CI19 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PdgfcQ8CI19 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.07■■□□□ 1.28
PdgfcQ8CI19 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.06■■□□□ 1.28
PdgfcQ8CI19 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.06■■□□□ 1.28
PdgfcQ8CI19 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.06■■□□□ 1.28
PdgfcQ8CI19 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PdgfcQ8CI19 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.06■■□□□ 1.28
PdgfcQ8CI19 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PdgfcQ8CI19 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 Gm12251-201ENSMUST00000117893 792 ntBASIC23.05■■□□□ 1.28
PdgfcQ8CI19 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PdgfcQ8CI19 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PdgfcQ8CI19 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PdgfcQ8CI19 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PdgfcQ8CI19 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PdgfcQ8CI19 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PdgfcQ8CI19 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PdgfcQ8CI19 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PdgfcQ8CI19 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms