Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Uba3Q8C878 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Uba3Q8C878 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uba3Q8C878 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.92■■□□□ 1.1
Uba3Q8C878 Gm45102-201ENSMUST00000207427 857 ntBASIC21.92■■□□□ 1.1
Uba3Q8C878 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uba3Q8C878 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uba3Q8C878 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Uba3Q8C878 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uba3Q8C878 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Uba3Q8C878 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uba3Q8C878 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uba3Q8C878 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uba3Q8C878 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Uba3Q8C878 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.91■■□□□ 1.1
Uba3Q8C878 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uba3Q8C878 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uba3Q8C878 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uba3Q8C878 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Uba3Q8C878 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uba3Q8C878 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Uba3Q8C878 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Uba3Q8C878 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Uba3Q8C878 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
Uba3Q8C878 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.9■■□□□ 1.1
Uba3Q8C878 Gm7417-201ENSMUST00000192950 473 ntBASIC21.9■■□□□ 1.1
Uba3Q8C878 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Uba3Q8C878 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Uba3Q8C878 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.9■■□□□ 1.1
Uba3Q8C878 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Uba3Q8C878 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Uba3Q8C878 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Uba3Q8C878 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Uba3Q8C878 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Uba3Q8C878 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Uba3Q8C878 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Uba3Q8C878 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Uba3Q8C878 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Uba3Q8C878 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Uba3Q8C878 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Uba3Q8C878 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Uba3Q8C878 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Uba3Q8C878 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Uba3Q8C878 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Uba3Q8C878 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Uba3Q8C878 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Uba3Q8C878 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Uba3Q8C878 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Uba3Q8C878 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Uba3Q8C878 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.87■■□□□ 1.09
Uba3Q8C878 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Uba3Q8C878 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.87■■□□□ 1.09
Uba3Q8C878 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.87■■□□□ 1.09
Uba3Q8C878 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Uba3Q8C878 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Uba3Q8C878 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Uba3Q8C878 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Uba3Q8C878 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.86■■□□□ 1.09
Uba3Q8C878 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Uba3Q8C878 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Uba3Q8C878 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Uba3Q8C878 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Uba3Q8C878 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Uba3Q8C878 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Uba3Q8C878 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Uba3Q8C878 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Uba3Q8C878 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Uba3Q8C878 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Uba3Q8C878 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.84■■□□□ 1.09
Uba3Q8C878 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Uba3Q8C878 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Uba3Q8C878 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.84■■□□□ 1.09
Uba3Q8C878 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.84■■□□□ 1.09
Uba3Q8C878 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Uba3Q8C878 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Uba3Q8C878 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Uba3Q8C878 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Uba3Q8C878 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Uba3Q8C878 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Uba3Q8C878 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.83■■□□□ 1.09
Uba3Q8C878 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Uba3Q8C878 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.83■■□□□ 1.09
Uba3Q8C878 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.83■■□□□ 1.09
Uba3Q8C878 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Uba3Q8C878 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Uba3Q8C878 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Uba3Q8C878 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Uba3Q8C878 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Uba3Q8C878 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Uba3Q8C878 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.82■■□□□ 1.08
Uba3Q8C878 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Uba3Q8C878 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Uba3Q8C878 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Uba3Q8C878 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.81■■□□□ 1.08
Uba3Q8C878 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Uba3Q8C878 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Uba3Q8C878 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Uba3Q8C878 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Uba3Q8C878 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Uba3Q8C878 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms