Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3rf3Q8C120 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3rf3Q8C120 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3rf3Q8C120 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.65■■□□□ 1.06
Sh3rf3Q8C120 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.65■■□□□ 1.06
Sh3rf3Q8C120 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3rf3Q8C120 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3rf3Q8C120 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3rf3Q8C120 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3rf3Q8C120 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3rf3Q8C120 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.64■■□□□ 1.05
Sh3rf3Q8C120 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.64■■□□□ 1.05
Sh3rf3Q8C120 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3rf3Q8C120 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sh3rf3Q8C120 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3rf3Q8C120 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3rf3Q8C120 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3rf3Q8C120 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.62■■□□□ 1.05
Sh3rf3Q8C120 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.61■■□□□ 1.05
Sh3rf3Q8C120 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3rf3Q8C120 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3rf3Q8C120 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3rf3Q8C120 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Sh3rf3Q8C120 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3rf3Q8C120 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3rf3Q8C120 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.61■■□□□ 1.05
Sh3rf3Q8C120 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Sh3rf3Q8C120 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Sh3rf3Q8C120 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3rf3Q8C120 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.6■■□□□ 1.05
Sh3rf3Q8C120 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3rf3Q8C120 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Sh3rf3Q8C120 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3rf3Q8C120 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3rf3Q8C120 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh3rf3Q8C120 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Sh3rf3Q8C120 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh3rf3Q8C120 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Sh3rf3Q8C120 Gm10232-201ENSMUST00000089221 720 ntBASIC21.59■■□□□ 1.05
Sh3rf3Q8C120 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh3rf3Q8C120 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh3rf3Q8C120 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sh3rf3Q8C120 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sh3rf3Q8C120 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sh3rf3Q8C120 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.58■■□□□ 1.05
Sh3rf3Q8C120 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sh3rf3Q8C120 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sh3rf3Q8C120 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf3Q8C120 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.57■■□□□ 1.04
Sh3rf3Q8C120 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf3Q8C120 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf3Q8C120 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf3Q8C120 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf3Q8C120 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf3Q8C120 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sh3rf3Q8C120 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3rf3Q8C120 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.56■■□□□ 1.04
Sh3rf3Q8C120 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3rf3Q8C120 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3rf3Q8C120 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sh3rf3Q8C120 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3rf3Q8C120 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3rf3Q8C120 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3rf3Q8C120 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3rf3Q8C120 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf3Q8C120 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf3Q8C120 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf3Q8C120 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.55■■□□□ 1.04
Sh3rf3Q8C120 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf3Q8C120 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf3Q8C120 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
Sh3rf3Q8C120 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.55■■□□□ 1.04
Sh3rf3Q8C120 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf3Q8C120 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3rf3Q8C120 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3rf3Q8C120 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3rf3Q8C120 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3rf3Q8C120 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Sh3rf3Q8C120 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3rf3Q8C120 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3rf3Q8C120 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.53■■□□□ 1.04
Sh3rf3Q8C120 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.53■■□□□ 1.04
Sh3rf3Q8C120 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Sh3rf3Q8C120 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3rf3Q8C120 Gm5812-201ENSMUST00000061073 957 ntBASIC21.53■■□□□ 1.04
Sh3rf3Q8C120 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3rf3Q8C120 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Sh3rf3Q8C120 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms