Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Gm40881-201ENSMUST00000223397 166 ntBASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrtm1Q8BXQ3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrtm1Q8BXQ3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrtm1Q8BXQ3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrtm1Q8BXQ3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.19■□□□□ 0.5
Lrtm1Q8BXQ3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.19■□□□□ 0.5
Lrtm1Q8BXQ3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.19■□□□□ 0.5
Lrtm1Q8BXQ3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lrtm1Q8BXQ3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lrtm1Q8BXQ3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.18■□□□□ 0.5
Lrtm1Q8BXQ3 Etf1-202ENSMUST00000180351 108 ntBASIC18.18■□□□□ 0.5
Lrtm1Q8BXQ3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrtm1Q8BXQ3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrtm1Q8BXQ3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrtm1Q8BXQ3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrtm1Q8BXQ3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrtm1Q8BXQ3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrtm1Q8BXQ3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Lrtm1Q8BXQ3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrtm1Q8BXQ3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrtm1Q8BXQ3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrtm1Q8BXQ3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrtm1Q8BXQ3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrtm1Q8BXQ3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lrtm1Q8BXQ3 Rps24-207ENSMUST00000224568 714 ntBASIC18.16■□□□□ 0.5
Lrtm1Q8BXQ3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lrtm1Q8BXQ3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrtm1Q8BXQ3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lrtm1Q8BXQ3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lrtm1Q8BXQ3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrtm1Q8BXQ3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrtm1Q8BXQ3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrtm1Q8BXQ3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrtm1Q8BXQ3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrtm1Q8BXQ3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrtm1Q8BXQ3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrtm1Q8BXQ3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrtm1Q8BXQ3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lrtm1Q8BXQ3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lrtm1Q8BXQ3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lrtm1Q8BXQ3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.14■□□□□ 0.49
Lrtm1Q8BXQ3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.14■□□□□ 0.49
Lrtm1Q8BXQ3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrtm1Q8BXQ3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lrtm1Q8BXQ3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrtm1Q8BXQ3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.13■□□□□ 0.49
Lrtm1Q8BXQ3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrtm1Q8BXQ3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrtm1Q8BXQ3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrtm1Q8BXQ3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrtm1Q8BXQ3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.12■□□□□ 0.49
Lrtm1Q8BXQ3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.12■□□□□ 0.49
Lrtm1Q8BXQ3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrtm1Q8BXQ3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrtm1Q8BXQ3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lrtm1Q8BXQ3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrtm1Q8BXQ3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrtm1Q8BXQ3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Lrtm1Q8BXQ3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.11■□□□□ 0.49
Lrtm1Q8BXQ3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lrtm1Q8BXQ3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Lrtm1Q8BXQ3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Lrtm1Q8BXQ3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrtm1Q8BXQ3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrtm1Q8BXQ3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.1■□□□□ 0.49
Lrtm1Q8BXQ3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.1■□□□□ 0.49
Lrtm1Q8BXQ3 Gm7417-201ENSMUST00000192950 473 ntBASIC18.1■□□□□ 0.49
Lrtm1Q8BXQ3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrtm1Q8BXQ3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrtm1Q8BXQ3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lrtm1Q8BXQ3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrtm1Q8BXQ3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrtm1Q8BXQ3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrtm1Q8BXQ3 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.09■□□□□ 0.49
Lrtm1Q8BXQ3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lrtm1Q8BXQ3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.09■□□□□ 0.49
Lrtm1Q8BXQ3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lrtm1Q8BXQ3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Lrtm1Q8BXQ3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
Lrtm1Q8BXQ3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lrtm1Q8BXQ3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Lrtm1Q8BXQ3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lrtm1Q8BXQ3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lrtm1Q8BXQ3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.08■□□□□ 0.48
Lrtm1Q8BXQ3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrtm1Q8BXQ3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lrtm1Q8BXQ3 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms