Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Usp8Q80U87 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp8Q80U87 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp8Q80U87 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Usp8Q80U87 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp8Q80U87 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp8Q80U87 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Usp8Q80U87 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp8Q80U87 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.7■□□□□ 0.9
Usp8Q80U87 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp8Q80U87 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.7■□□□□ 0.9
Usp8Q80U87 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Usp8Q80U87 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Usp8Q80U87 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp8Q80U87 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Usp8Q80U87 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp8Q80U87 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp8Q80U87 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp8Q80U87 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp8Q80U87 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp8Q80U87 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp8Q80U87 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp8Q80U87 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp8Q80U87 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp8Q80U87 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp8Q80U87 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Usp8Q80U87 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp8Q80U87 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.67■□□□□ 0.9
Usp8Q80U87 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp8Q80U87 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp8Q80U87 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp8Q80U87 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp8Q80U87 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp8Q80U87 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp8Q80U87 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp8Q80U87 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Usp8Q80U87 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Usp8Q80U87 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp8Q80U87 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp8Q80U87 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp8Q80U87 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp8Q80U87 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp8Q80U87 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp8Q80U87 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp8Q80U87 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp8Q80U87 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp8Q80U87 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp8Q80U87 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp8Q80U87 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Usp8Q80U87 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
Usp8Q80U87 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.64■□□□□ 0.89
Usp8Q80U87 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp8Q80U87 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp8Q80U87 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp8Q80U87 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp8Q80U87 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp8Q80U87 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp8Q80U87 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp8Q80U87 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp8Q80U87 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp8Q80U87 Cap2-205ENSMUST00000225824 1634 ntBASIC20.63■□□□□ 0.89
Usp8Q80U87 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp8Q80U87 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp8Q80U87 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp8Q80U87 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp8Q80U87 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp8Q80U87 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp8Q80U87 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp8Q80U87 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.62■□□□□ 0.89
Usp8Q80U87 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp8Q80U87 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp8Q80U87 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp8Q80U87 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Usp8Q80U87 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp8Q80U87 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.61■□□□□ 0.89
Usp8Q80U87 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp8Q80U87 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp8Q80U87 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp8Q80U87 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp8Q80U87 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp8Q80U87 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp8Q80U87 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Usp8Q80U87 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.6■□□□□ 0.89
Usp8Q80U87 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp8Q80U87 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Usp8Q80U87 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp8Q80U87 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp8Q80U87 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Usp8Q80U87 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp8Q80U87 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp8Q80U87 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp8Q80U87 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp8Q80U87 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.59■□□□□ 0.89
Usp8Q80U87 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.59■□□□□ 0.89
Usp8Q80U87 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp8Q80U87 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp8Q80U87 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp8Q80U87 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.58■□□□□ 0.89
Usp8Q80U87 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp8Q80U87 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms