Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih3Q6ZWS4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih3Q6ZWS4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cnih3Q6ZWS4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih3Q6ZWS4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih3Q6ZWS4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih3Q6ZWS4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cnih3Q6ZWS4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cnih3Q6ZWS4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih3Q6ZWS4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih3Q6ZWS4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih3Q6ZWS4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih3Q6ZWS4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih3Q6ZWS4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih3Q6ZWS4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih3Q6ZWS4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih3Q6ZWS4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cnih3Q6ZWS4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cnih3Q6ZWS4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cnih3Q6ZWS4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cnih3Q6ZWS4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.09■□□□□ 0.65
Cnih3Q6ZWS4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cnih3Q6ZWS4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cnih3Q6ZWS4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.09■□□□□ 0.65
Cnih3Q6ZWS4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cnih3Q6ZWS4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cnih3Q6ZWS4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Cnih3Q6ZWS4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cnih3Q6ZWS4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cnih3Q6ZWS4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Cnih3Q6ZWS4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cnih3Q6ZWS4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cnih3Q6ZWS4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cnih3Q6ZWS4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.08■□□□□ 0.64
Cnih3Q6ZWS4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cnih3Q6ZWS4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cnih3Q6ZWS4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cnih3Q6ZWS4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Cnih3Q6ZWS4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cnih3Q6ZWS4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cnih3Q6ZWS4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cnih3Q6ZWS4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cnih3Q6ZWS4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Gm44428-201ENSMUST00000204474 874 ntBASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cnih3Q6ZWS4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Cnih3Q6ZWS4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Cnih3Q6ZWS4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cnih3Q6ZWS4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Cnih3Q6ZWS4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cnih3Q6ZWS4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cnih3Q6ZWS4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.02■□□□□ 0.64
Cnih3Q6ZWS4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cnih3Q6ZWS4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cnih3Q6ZWS4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cnih3Q6ZWS4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms