Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lsm8Q6ZWM4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lsm8Q6ZWM4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Lsm8Q6ZWM4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lsm8Q6ZWM4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm8Q6ZWM4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm8Q6ZWM4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm8Q6ZWM4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.9■■□□□ 1.1
Lsm8Q6ZWM4 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.9■■□□□ 1.1
Lsm8Q6ZWM4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.9■■□□□ 1.1
Lsm8Q6ZWM4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
Lsm8Q6ZWM4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm8Q6ZWM4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm8Q6ZWM4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm8Q6ZWM4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lsm8Q6ZWM4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lsm8Q6ZWM4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lsm8Q6ZWM4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.89■■□□□ 1.09
Lsm8Q6ZWM4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lsm8Q6ZWM4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Lsm8Q6ZWM4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Lsm8Q6ZWM4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm8Q6ZWM4 Gm5812-201ENSMUST00000061073 957 ntBASIC21.88■■□□□ 1.09
Lsm8Q6ZWM4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm8Q6ZWM4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm8Q6ZWM4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm8Q6ZWM4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm8Q6ZWM4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm8Q6ZWM4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm8Q6ZWM4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm8Q6ZWM4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm8Q6ZWM4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.86■■□□□ 1.09
Lsm8Q6ZWM4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm8Q6ZWM4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm8Q6ZWM4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Lsm8Q6ZWM4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.85■■□□□ 1.09
Lsm8Q6ZWM4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm8Q6ZWM4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm8Q6ZWM4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm8Q6ZWM4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lsm8Q6ZWM4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.84■■□□□ 1.09
Lsm8Q6ZWM4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lsm8Q6ZWM4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.84■■□□□ 1.09
Lsm8Q6ZWM4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Lsm8Q6ZWM4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lsm8Q6ZWM4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lsm8Q6ZWM4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lsm8Q6ZWM4 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.83■■□□□ 1.09
Lsm8Q6ZWM4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lsm8Q6ZWM4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lsm8Q6ZWM4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lsm8Q6ZWM4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lsm8Q6ZWM4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lsm8Q6ZWM4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Lsm8Q6ZWM4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lsm8Q6ZWM4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lsm8Q6ZWM4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.82■■□□□ 1.08
Lsm8Q6ZWM4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm8Q6ZWM4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm8Q6ZWM4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Lsm8Q6ZWM4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm8Q6ZWM4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm8Q6ZWM4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm8Q6ZWM4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm8Q6ZWM4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm8Q6ZWM4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Gm40881-201ENSMUST00000223397 166 ntBASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm8Q6ZWM4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm8Q6ZWM4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.79■■□□□ 1.08
Lsm8Q6ZWM4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm8Q6ZWM4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm8Q6ZWM4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lsm8Q6ZWM4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Lsm8Q6ZWM4 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.78■■□□□ 1.08
Lsm8Q6ZWM4 Gm15820-201ENSMUST00000201566 728 ntBASIC21.78■■□□□ 1.08
Lsm8Q6ZWM4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lsm8Q6ZWM4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.78■■□□□ 1.08
Lsm8Q6ZWM4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm8Q6ZWM4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.77■■□□□ 1.08
Lsm8Q6ZWM4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm8Q6ZWM4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm8Q6ZWM4 Gm15546-201ENSMUST00000122095 826 ntBASIC21.77■■□□□ 1.08
Lsm8Q6ZWM4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.77■■□□□ 1.08
Lsm8Q6ZWM4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm8Q6ZWM4 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.76■■□□□ 1.07
Lsm8Q6ZWM4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm8Q6ZWM4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.76■■□□□ 1.07
Lsm8Q6ZWM4 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.76■■□□□ 1.07
Lsm8Q6ZWM4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm8Q6ZWM4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms