Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssx9Q6XAS3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
Ssx9Q6XAS3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssx9Q6XAS3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.7■□□□□ 0.9
Ssx9Q6XAS3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.7■□□□□ 0.9
Ssx9Q6XAS3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.7■□□□□ 0.9
Ssx9Q6XAS3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ssx9Q6XAS3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssx9Q6XAS3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssx9Q6XAS3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssx9Q6XAS3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssx9Q6XAS3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ssx9Q6XAS3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssx9Q6XAS3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.67■□□□□ 0.9
Ssx9Q6XAS3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssx9Q6XAS3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssx9Q6XAS3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssx9Q6XAS3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.67■□□□□ 0.9
Ssx9Q6XAS3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.67■□□□□ 0.9
Ssx9Q6XAS3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Gm45444-201ENSMUST00000211394 898 ntBASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssx9Q6XAS3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssx9Q6XAS3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ssx9Q6XAS3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.64■□□□□ 0.89
Ssx9Q6XAS3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.64■□□□□ 0.89
Ssx9Q6XAS3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssx9Q6XAS3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssx9Q6XAS3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.64■□□□□ 0.89
Ssx9Q6XAS3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Ssx9Q6XAS3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ssx9Q6XAS3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ssx9Q6XAS3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssx9Q6XAS3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ssx9Q6XAS3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ssx9Q6XAS3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ssx9Q6XAS3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
Ssx9Q6XAS3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ssx9Q6XAS3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ssx9Q6XAS3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.61■□□□□ 0.89
Ssx9Q6XAS3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ssx9Q6XAS3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ssx9Q6XAS3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ssx9Q6XAS3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms