Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Smarcd1Q61466 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.74■■□□□ 1.07
Smarcd1Q61466 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcd1Q61466 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcd1Q61466 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.74■■□□□ 1.07
Smarcd1Q61466 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcd1Q61466 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcd1Q61466 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcd1Q61466 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcd1Q61466 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Smarcd1Q61466 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.73■■□□□ 1.07
Smarcd1Q61466 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcd1Q61466 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcd1Q61466 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcd1Q61466 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcd1Q61466 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.72■■□□□ 1.07
Smarcd1Q61466 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Smarcd1Q61466 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcd1Q61466 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Gm12922-201ENSMUST00000120626 809 ntBASIC21.7■■□□□ 1.06
Smarcd1Q61466 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.7■■□□□ 1.06
Smarcd1Q61466 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd1Q61466 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcd1Q61466 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcd1Q61466 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Smarcd1Q61466 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcd1Q61466 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Smarcd1Q61466 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Smarcd1Q61466 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcd1Q61466 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcd1Q61466 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcd1Q61466 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcd1Q61466 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Smarcd1Q61466 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcd1Q61466 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcd1Q61466 Gm9847-201ENSMUST00000052528 599 ntBASIC21.68■■□□□ 1.06
Smarcd1Q61466 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Smarcd1Q61466 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.68■■□□□ 1.06
Smarcd1Q61466 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcd1Q61466 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcd1Q61466 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcd1Q61466 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcd1Q61466 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcd1Q61466 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcd1Q61466 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.66■■□□□ 1.06
Smarcd1Q61466 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarcd1Q61466 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Smarcd1Q61466 Gm9870-201ENSMUST00000063874 645 ntBASIC21.66■■□□□ 1.06
Smarcd1Q61466 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smarcd1Q61466 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.66■■□□□ 1.06
Smarcd1Q61466 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcd1Q61466 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Smarcd1Q61466 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcd1Q61466 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.65■■□□□ 1.06
Smarcd1Q61466 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.65■■□□□ 1.06
Smarcd1Q61466 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.65■■□□□ 1.06
Smarcd1Q61466 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
Smarcd1Q61466 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcd1Q61466 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
Smarcd1Q61466 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.64■■□□□ 1.06
Smarcd1Q61466 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smarcd1Q61466 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd1Q61466 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd1Q61466 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd1Q61466 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd1Q61466 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Smarcd1Q61466 Gm13241-201ENSMUST00000094493 780 ntBASIC21.64■■□□□ 1.05
Smarcd1Q61466 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd1Q61466 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd1Q61466 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd1Q61466 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Smarcd1Q61466 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd1Q61466 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd1Q61466 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcd1Q61466 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcd1Q61466 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcd1Q61466 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.63■■□□□ 1.05
Smarcd1Q61466 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Smarcd1Q61466 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcd1Q61466 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.63■■□□□ 1.05
Smarcd1Q61466 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.63■■□□□ 1.05
Smarcd1Q61466 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.63■■□□□ 1.05
Smarcd1Q61466 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.63■■□□□ 1.05
Smarcd1Q61466 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.63■■□□□ 1.05
Smarcd1Q61466 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcd1Q61466 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcd1Q61466 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.62■■□□□ 1.05
Smarcd1Q61466 Gm7143-201ENSMUST00000222811 859 ntBASIC21.62■■□□□ 1.05
Smarcd1Q61466 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcd1Q61466 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms