Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cacna1eQ61290 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1eQ61290 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1eQ61290 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Cacna1eQ61290 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1eQ61290 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cacna1eQ61290 Mir7075-201ENSMUST00000184187 82 ntBASIC20.75■□□□□ 0.91
Cacna1eQ61290 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1eQ61290 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1eQ61290 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1eQ61290 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1eQ61290 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1eQ61290 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1eQ61290 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cacna1eQ61290 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1eQ61290 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1eQ61290 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1eQ61290 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1eQ61290 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
Cacna1eQ61290 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.74■□□□□ 0.91
Cacna1eQ61290 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1eQ61290 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1eQ61290 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1eQ61290 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.73■□□□□ 0.91
Cacna1eQ61290 Gm43017-201ENSMUST00000198296 752 ntBASIC20.73■□□□□ 0.91
Cacna1eQ61290 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.73■□□□□ 0.91
Cacna1eQ61290 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1eQ61290 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.73■□□□□ 0.91
Cacna1eQ61290 Gm7143-201ENSMUST00000222811 859 ntBASIC20.73■□□□□ 0.91
Cacna1eQ61290 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1eQ61290 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cacna1eQ61290 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1eQ61290 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1eQ61290 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1eQ61290 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1eQ61290 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1eQ61290 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.71■□□□□ 0.91
Cacna1eQ61290 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1eQ61290 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1eQ61290 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1eQ61290 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1eQ61290 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.71■□□□□ 0.91
Cacna1eQ61290 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.71■□□□□ 0.91
Cacna1eQ61290 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1eQ61290 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cacna1eQ61290 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1eQ61290 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1eQ61290 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1eQ61290 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1eQ61290 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.7■□□□□ 0.9
Cacna1eQ61290 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.7■□□□□ 0.9
Cacna1eQ61290 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1eQ61290 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Cacna1eQ61290 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1eQ61290 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1eQ61290 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1eQ61290 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1eQ61290 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1eQ61290 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1eQ61290 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.66■□□□□ 0.9
Cacna1eQ61290 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1eQ61290 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.66■□□□□ 0.9
Cacna1eQ61290 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.66■□□□□ 0.9
Cacna1eQ61290 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cacna1eQ61290 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1eQ61290 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1eQ61290 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
Cacna1eQ61290 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Gm26571-201ENSMUST00000181399 666 ntBASIC20.65■□□□□ 0.9
Cacna1eQ61290 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.65■□□□□ 0.9
Cacna1eQ61290 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Gm43530-201ENSMUST00000195920 274 ntBASIC20.65■□□□□ 0.9
Cacna1eQ61290 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1eQ61290 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cacna1eQ61290 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cacna1eQ61290 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cacna1eQ61290 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1eQ61290 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1eQ61290 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1eQ61290 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.63■□□□□ 0.89
Cacna1eQ61290 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1eQ61290 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.63■□□□□ 0.89
Cacna1eQ61290 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cacna1eQ61290 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cacna1eQ61290 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Cacna1eQ61290 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1eQ61290 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1eQ61290 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.62■□□□□ 0.89
Cacna1eQ61290 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 349 ms