Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-3Q5R1E6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav6-3Q5R1E6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav6-3Q5R1E6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-3Q5R1E6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav6-3Q5R1E6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-3Q5R1E6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav6-3Q5R1E6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-3Q5R1E6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-3Q5R1E6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-3Q5R1E6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-3Q5R1E6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-3Q5R1E6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-3Q5R1E6 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.68■□□□□ 0.26
Trav6-3Q5R1E6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav6-3Q5R1E6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-3Q5R1E6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-3Q5R1E6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-3Q5R1E6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-3Q5R1E6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-3Q5R1E6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-3Q5R1E6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-3Q5R1E6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-3Q5R1E6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-3Q5R1E6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-3Q5R1E6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-3Q5R1E6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-3Q5R1E6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-3Q5R1E6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-3Q5R1E6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav6-3Q5R1E6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav6-3Q5R1E6 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.65■□□□□ 0.26
Trav6-3Q5R1E6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav6-3Q5R1E6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-3Q5R1E6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-3Q5R1E6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav6-3Q5R1E6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-3Q5R1E6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.63■□□□□ 0.25
Trav6-3Q5R1E6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav6-3Q5R1E6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-3Q5R1E6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-3Q5R1E6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-3Q5R1E6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav6-3Q5R1E6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Trav6-3Q5R1E6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-3Q5R1E6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-3Q5R1E6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav6-3Q5R1E6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-3Q5R1E6 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.61■□□□□ 0.25
Trav6-3Q5R1E6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-3Q5R1E6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-3Q5R1E6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav6-3Q5R1E6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav6-3Q5R1E6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav6-3Q5R1E6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-3Q5R1E6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav6-3Q5R1E6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms