Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.93■□□□□ 0.78
Clhc1Q5M6W3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clhc1Q5M6W3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clhc1Q5M6W3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clhc1Q5M6W3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.92■□□□□ 0.78
Clhc1Q5M6W3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clhc1Q5M6W3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Clhc1Q5M6W3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clhc1Q5M6W3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Gm14523-201ENSMUST00000117260 558 ntBASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clhc1Q5M6W3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clhc1Q5M6W3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clhc1Q5M6W3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clhc1Q5M6W3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.9■□□□□ 0.78
Clhc1Q5M6W3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.9■□□□□ 0.78
Clhc1Q5M6W3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clhc1Q5M6W3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.9■□□□□ 0.78
Clhc1Q5M6W3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clhc1Q5M6W3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clhc1Q5M6W3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Clhc1Q5M6W3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clhc1Q5M6W3 Gm7332-201ENSMUST00000118351 454 ntBASIC19.89■□□□□ 0.77
Clhc1Q5M6W3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clhc1Q5M6W3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Clhc1Q5M6W3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clhc1Q5M6W3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Gm12366-201ENSMUST00000121722 873 ntBASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Gm5786-201ENSMUST00000085368 882 ntBASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clhc1Q5M6W3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.87■□□□□ 0.77
Clhc1Q5M6W3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clhc1Q5M6W3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clhc1Q5M6W3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Clhc1Q5M6W3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clhc1Q5M6W3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Clhc1Q5M6W3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clhc1Q5M6W3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clhc1Q5M6W3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clhc1Q5M6W3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clhc1Q5M6W3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clhc1Q5M6W3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clhc1Q5M6W3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.86■□□□□ 0.77
Clhc1Q5M6W3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clhc1Q5M6W3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.86■□□□□ 0.77
Clhc1Q5M6W3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clhc1Q5M6W3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clhc1Q5M6W3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
Clhc1Q5M6W3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Clhc1Q5M6W3 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clhc1Q5M6W3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clhc1Q5M6W3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clhc1Q5M6W3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms