Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.15■□□□□ 0.66
Col10a1Q05306 Gm40881-201ENSMUST00000223397 166 ntBASIC19.15■□□□□ 0.66
Col10a1Q05306 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col10a1Q05306 Gm9959-201ENSMUST00000068277 390 ntBASIC19.15■□□□□ 0.66
Col10a1Q05306 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col10a1Q05306 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Col10a1Q05306 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col10a1Q05306 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col10a1Q05306 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.14■□□□□ 0.66
Col10a1Q05306 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Col10a1Q05306 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Col10a1Q05306 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col10a1Q05306 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col10a1Q05306 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col10a1Q05306 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col10a1Q05306 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col10a1Q05306 Etf1-202ENSMUST00000180351 108 ntBASIC19.13■□□□□ 0.65
Col10a1Q05306 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col10a1Q05306 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col10a1Q05306 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col10a1Q05306 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col10a1Q05306 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col10a1Q05306 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col10a1Q05306 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Col10a1Q05306 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Col10a1Q05306 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col10a1Q05306 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.12■□□□□ 0.65
Col10a1Q05306 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col10a1Q05306 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Col10a1Q05306 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col10a1Q05306 Rps24-207ENSMUST00000224568 714 ntBASIC19.11■□□□□ 0.65
Col10a1Q05306 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.11■□□□□ 0.65
Col10a1Q05306 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col10a1Q05306 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col10a1Q05306 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col10a1Q05306 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col10a1Q05306 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col10a1Q05306 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col10a1Q05306 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col10a1Q05306 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col10a1Q05306 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.1■□□□□ 0.65
Col10a1Q05306 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col10a1Q05306 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.1■□□□□ 0.65
Col10a1Q05306 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col10a1Q05306 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Col10a1Q05306 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col10a1Q05306 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col10a1Q05306 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.09■□□□□ 0.65
Col10a1Q05306 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col10a1Q05306 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col10a1Q05306 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col10a1Q05306 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col10a1Q05306 Gm14117-201ENSMUST00000122417 843 ntBASIC19.09■□□□□ 0.65
Col10a1Q05306 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.09■□□□□ 0.65
Col10a1Q05306 Gm7417-201ENSMUST00000192950 473 ntBASIC19.09■□□□□ 0.65
Col10a1Q05306 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col10a1Q05306 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col10a1Q05306 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.09■□□□□ 0.65
Col10a1Q05306 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col10a1Q05306 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col10a1Q05306 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col10a1Q05306 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col10a1Q05306 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Col10a1Q05306 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col10a1Q05306 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col10a1Q05306 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
Col10a1Q05306 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Col10a1Q05306 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col10a1Q05306 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col10a1Q05306 Gm45102-201ENSMUST00000207427 857 ntBASIC19.07■□□□□ 0.64
Col10a1Q05306 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.07■□□□□ 0.64
Col10a1Q05306 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col10a1Q05306 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Col10a1Q05306 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col10a1Q05306 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col10a1Q05306 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col10a1Q05306 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col10a1Q05306 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col10a1Q05306 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Col10a1Q05306 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.06■□□□□ 0.64
Col10a1Q05306 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col10a1Q05306 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col10a1Q05306 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col10a1Q05306 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Col10a1Q05306 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col10a1Q05306 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.05■□□□□ 0.64
Col10a1Q05306 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col10a1Q05306 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col10a1Q05306 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.05■□□□□ 0.64
Col10a1Q05306 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.05■□□□□ 0.64
Col10a1Q05306 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col10a1Q05306 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col10a1Q05306 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Col10a1Q05306 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col10a1Q05306 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col10a1Q05306 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col10a1Q05306 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col10a1Q05306 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col10a1Q05306 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col10a1Q05306 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms