Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
PHC1P78364 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
PHC1P78364 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PHC1P78364 DUSP8P5-201ENST00000422884 1815 ntBASIC21.99■■□□□ 1.11
PHC1P78364 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PHC1P78364 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.98■■□□□ 1.11
PHC1P78364 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
PHC1P78364 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PHC1P78364 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PHC1P78364 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.98■■□□□ 1.11
PHC1P78364 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PHC1P78364 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
PHC1P78364 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PHC1P78364 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.97■■□□□ 1.11
PHC1P78364 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PHC1P78364 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.97■■□□□ 1.11
PHC1P78364 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.97■■□□□ 1.11
PHC1P78364 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PHC1P78364 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.96■■□□□ 1.11
PHC1P78364 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.96■■□□□ 1.11
PHC1P78364 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PHC1P78364 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.96■■□□□ 1.11
PHC1P78364 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.96■■□□□ 1.11
PHC1P78364 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PHC1P78364 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PHC1P78364 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.95■■□□□ 1.11
PHC1P78364 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PHC1P78364 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.95■■□□□ 1.1
PHC1P78364 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.95■■□□□ 1.1
PHC1P78364 HSD17B1P1-201ENST00000590052 955 ntBASIC21.95■■□□□ 1.1
PHC1P78364 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PHC1P78364 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.95■■□□□ 1.1
PHC1P78364 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PHC1P78364 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PHC1P78364 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PHC1P78364 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.94■■□□□ 1.1
PHC1P78364 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.94■■□□□ 1.1
PHC1P78364 AC087393.1-201ENST00000582896 145 ntBASIC21.94■■□□□ 1.1
PHC1P78364 AC018755.3-202ENST00000596210 929 ntBASIC21.94■■□□□ 1.1
PHC1P78364 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
PHC1P78364 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PHC1P78364 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PHC1P78364 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.94■■□□□ 1.1
PHC1P78364 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHC1P78364 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHC1P78364 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.93■■□□□ 1.1
PHC1P78364 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHC1P78364 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.93■■□□□ 1.1
PHC1P78364 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PHC1P78364 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
PHC1P78364 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PHC1P78364 AC090877.2-201ENST00000558441 1738 ntBASIC21.92■■□□□ 1.1
PHC1P78364 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 DUX4L9-201ENST00000449051 1259 ntBASIC21.92■■□□□ 1.1
PHC1P78364 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PHC1P78364 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PHC1P78364 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PHC1P78364 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.92■■□□□ 1.1
PHC1P78364 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PHC1P78364 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PHC1P78364 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PHC1P78364 C9orf163-202ENST00000624034 2573 ntBASIC21.91■■□□□ 1.1
PHC1P78364 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.91■■□□□ 1.1
PHC1P78364 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PHC1P78364 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.91■■□□□ 1.1
PHC1P78364 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PHC1P78364 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
PHC1P78364 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PHC1P78364 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PHC1P78364 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PHC1P78364 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PHC1P78364 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PHC1P78364 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PHC1P78364 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHC1P78364 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PHC1P78364 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.89■■□□□ 1.09
PHC1P78364 U85056.1-201ENST00000616429 682 ntBASIC21.89■■□□□ 1.09
PHC1P78364 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.89■■□□□ 1.09
PHC1P78364 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PHC1P78364 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PHC1P78364 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PHC1P78364 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PHC1P78364 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHC1P78364 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHC1P78364 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PHC1P78364 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PHC1P78364 MIR6765-201ENST00000614092 87 ntBASIC21.88■■□□□ 1.09
PHC1P78364 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHC1P78364 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PHC1P78364 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PHC1P78364 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms