Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccr1l1P51676 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.8■□□□□ 0.6
Ccr1l1P51676 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccr1l1P51676 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccr1l1P51676 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccr1l1P51676 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccr1l1P51676 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccr1l1P51676 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccr1l1P51676 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.79■□□□□ 0.6
Ccr1l1P51676 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.79■□□□□ 0.6
Ccr1l1P51676 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccr1l1P51676 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccr1l1P51676 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccr1l1P51676 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccr1l1P51676 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccr1l1P51676 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccr1l1P51676 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccr1l1P51676 Gm7417-201ENSMUST00000192950 473 ntBASIC18.78■□□□□ 0.6
Ccr1l1P51676 Gm9959-201ENSMUST00000068277 390 ntBASIC18.78■□□□□ 0.6
Ccr1l1P51676 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccr1l1P51676 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccr1l1P51676 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccr1l1P51676 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.78■□□□□ 0.6
Ccr1l1P51676 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccr1l1P51676 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccr1l1P51676 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccr1l1P51676 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Ccr1l1P51676 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccr1l1P51676 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccr1l1P51676 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccr1l1P51676 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccr1l1P51676 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Ccr1l1P51676 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ccr1l1P51676 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccr1l1P51676 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ccr1l1P51676 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccr1l1P51676 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccr1l1P51676 Gm45102-201ENSMUST00000207427 857 ntBASIC18.76■□□□□ 0.59
Ccr1l1P51676 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccr1l1P51676 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccr1l1P51676 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccr1l1P51676 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccr1l1P51676 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ccr1l1P51676 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccr1l1P51676 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccr1l1P51676 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ccr1l1P51676 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccr1l1P51676 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccr1l1P51676 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.74■□□□□ 0.59
Ccr1l1P51676 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccr1l1P51676 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccr1l1P51676 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Ccr1l1P51676 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccr1l1P51676 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccr1l1P51676 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccr1l1P51676 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccr1l1P51676 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccr1l1P51676 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccr1l1P51676 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Ccr1l1P51676 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccr1l1P51676 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Ccr1l1P51676 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.73■□□□□ 0.59
Ccr1l1P51676 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccr1l1P51676 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccr1l1P51676 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccr1l1P51676 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccr1l1P51676 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccr1l1P51676 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccr1l1P51676 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccr1l1P51676 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccr1l1P51676 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccr1l1P51676 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccr1l1P51676 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccr1l1P51676 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccr1l1P51676 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccr1l1P51676 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccr1l1P51676 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccr1l1P51676 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccr1l1P51676 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccr1l1P51676 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccr1l1P51676 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccr1l1P51676 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.71■□□□□ 0.59
Ccr1l1P51676 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Ccr1l1P51676 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccr1l1P51676 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccr1l1P51676 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccr1l1P51676 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccr1l1P51676 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccr1l1P51676 Gm14117-201ENSMUST00000122417 843 ntBASIC18.7■□□□□ 0.58
Ccr1l1P51676 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.7■□□□□ 0.58
Ccr1l1P51676 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccr1l1P51676 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccr1l1P51676 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccr1l1P51676 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccr1l1P51676 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr1l1P51676 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr1l1P51676 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr1l1P51676 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr1l1P51676 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.69■□□□□ 0.58
Ccr1l1P51676 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms