Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nkx2-6P43688 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-6P43688 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-6P43688 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.69■□□□□ 0.74
Nkx2-6P43688 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.69■□□□□ 0.74
Nkx2-6P43688 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.69■□□□□ 0.74
Nkx2-6P43688 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nkx2-6P43688 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.69■□□□□ 0.74
Nkx2-6P43688 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-6P43688 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.69■□□□□ 0.74
Nkx2-6P43688 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-6P43688 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.68■□□□□ 0.74
Nkx2-6P43688 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-6P43688 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx2-6P43688 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx2-6P43688 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-6P43688 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-6P43688 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.66■□□□□ 0.74
Nkx2-6P43688 Gm9870-201ENSMUST00000063874 645 ntBASIC19.66■□□□□ 0.74
Nkx2-6P43688 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx2-6P43688 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.66■□□□□ 0.74
Nkx2-6P43688 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-6P43688 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nkx2-6P43688 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Nkx2-6P43688 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Nkx2-6P43688 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-6P43688 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Nkx2-6P43688 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-6P43688 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx2-6P43688 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nkx2-6P43688 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-6P43688 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Nkx2-6P43688 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-6P43688 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-6P43688 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx2-6P43688 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-6P43688 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx2-6P43688 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nkx2-6P43688 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.63■□□□□ 0.73
Nkx2-6P43688 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Serp2-204ENSMUST00000228055 705 ntBASIC19.62■□□□□ 0.73
Nkx2-6P43688 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-6P43688 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-6P43688 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-6P43688 Gm45417-201ENSMUST00000209533 758 ntBASIC19.61■□□□□ 0.73
Nkx2-6P43688 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nkx2-6P43688 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-6P43688 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-6P43688 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Nkx2-6P43688 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-6P43688 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-6P43688 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-6P43688 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-6P43688 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-6P43688 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-6P43688 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-6P43688 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.59■□□□□ 0.73
Nkx2-6P43688 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.59■□□□□ 0.73
Nkx2-6P43688 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.59■□□□□ 0.73
Nkx2-6P43688 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-6P43688 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-6P43688 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-6P43688 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-6P43688 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx2-6P43688 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.58■□□□□ 0.73
Nkx2-6P43688 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Nkx2-6P43688 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-6P43688 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms