Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rom1P32958 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.44■□□□□ 0.22
Rom1P32958 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Rom1P32958 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.43■□□□□ 0.22
Rom1P32958 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rom1P32958 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rom1P32958 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rom1P32958 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rom1P32958 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rom1P32958 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rom1P32958 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rom1P32958 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rom1P32958 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rom1P32958 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rom1P32958 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rom1P32958 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rom1P32958 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.42■□□□□ 0.22
Rom1P32958 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.42■□□□□ 0.22
Rom1P32958 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rom1P32958 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rom1P32958 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rom1P32958 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rom1P32958 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rom1P32958 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rom1P32958 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rom1P32958 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rom1P32958 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rom1P32958 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rom1P32958 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rom1P32958 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.4■□□□□ 0.22
Rom1P32958 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rom1P32958 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rom1P32958 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.4■□□□□ 0.22
Rom1P32958 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.4■□□□□ 0.22
Rom1P32958 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rom1P32958 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rom1P32958 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.4■□□□□ 0.22
Rom1P32958 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rom1P32958 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rom1P32958 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Rom1P32958 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rom1P32958 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rom1P32958 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Rom1P32958 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rom1P32958 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rom1P32958 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.39■□□□□ 0.21
Rom1P32958 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.39■□□□□ 0.21
Rom1P32958 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rom1P32958 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rom1P32958 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rom1P32958 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rom1P32958 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rom1P32958 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rom1P32958 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rom1P32958 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rom1P32958 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rom1P32958 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rom1P32958 Gm8503-201ENSMUST00000118131 455 ntBASIC16.37■□□□□ 0.21
Rom1P32958 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rom1P32958 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rom1P32958 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rom1P32958 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rom1P32958 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rom1P32958 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rom1P32958 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rom1P32958 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rom1P32958 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rom1P32958 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.36■□□□□ 0.21
Rom1P32958 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.36■□□□□ 0.21
Rom1P32958 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rom1P32958 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rom1P32958 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rom1P32958 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rom1P32958 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rom1P32958 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rom1P32958 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rom1P32958 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms