Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf1aP25118 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.36■□□□□ 0.37
Tnfrsf1aP25118 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf1aP25118 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf1aP25118 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf1aP25118 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf1aP25118 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf1aP25118 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf1aP25118 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf1aP25118 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1aP25118 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1aP25118 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf1aP25118 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf1aP25118 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf1aP25118 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Tnfrsf1aP25118 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1aP25118 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1aP25118 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1aP25118 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1aP25118 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1aP25118 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1aP25118 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tnfrsf1aP25118 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1aP25118 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1aP25118 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1aP25118 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1aP25118 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1aP25118 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1aP25118 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1aP25118 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf1aP25118 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnfrsf1aP25118 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf1aP25118 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf1aP25118 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1aP25118 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1aP25118 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1aP25118 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf1aP25118 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Tnfrsf1aP25118 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf1aP25118 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf1aP25118 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.27■□□□□ 0.36
Tnfrsf1aP25118 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.27■□□□□ 0.36
Tnfrsf1aP25118 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfrsf1aP25118 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfrsf1aP25118 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 138.2 ms