Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.57■□□□□ 0.56
Ccl3P10855 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl3P10855 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl3P10855 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl3P10855 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl3P10855 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ccl3P10855 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl3P10855 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl3P10855 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl3P10855 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.57■□□□□ 0.56
Ccl3P10855 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ccl3P10855 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccl3P10855 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccl3P10855 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccl3P10855 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccl3P10855 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccl3P10855 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.55■□□□□ 0.56
Ccl3P10855 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccl3P10855 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccl3P10855 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccl3P10855 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.55■□□□□ 0.56
Ccl3P10855 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccl3P10855 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccl3P10855 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.54■□□□□ 0.56
Ccl3P10855 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
Ccl3P10855 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccl3P10855 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccl3P10855 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccl3P10855 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccl3P10855 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.53■□□□□ 0.56
Ccl3P10855 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.53■□□□□ 0.56
Ccl3P10855 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.53■□□□□ 0.56
Ccl3P10855 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccl3P10855 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccl3P10855 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccl3P10855 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccl3P10855 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccl3P10855 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccl3P10855 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccl3P10855 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.52■□□□□ 0.56
Ccl3P10855 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccl3P10855 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccl3P10855 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccl3P10855 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ccl3P10855 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccl3P10855 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.51■□□□□ 0.55
Ccl3P10855 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccl3P10855 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ccl3P10855 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccl3P10855 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccl3P10855 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ccl3P10855 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccl3P10855 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccl3P10855 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccl3P10855 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccl3P10855 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccl3P10855 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccl3P10855 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccl3P10855 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccl3P10855 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccl3P10855 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccl3P10855 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.49■□□□□ 0.55
Ccl3P10855 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccl3P10855 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccl3P10855 Gm43173-201ENSMUST00000202246 593 ntBASIC18.49■□□□□ 0.55
Ccl3P10855 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccl3P10855 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccl3P10855 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccl3P10855 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Ccl3P10855 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccl3P10855 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccl3P10855 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccl3P10855 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Ccl3P10855 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.47■□□□□ 0.55
Ccl3P10855 Gm12251-201ENSMUST00000117893 792 ntBASIC18.47■□□□□ 0.55
Ccl3P10855 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.47■□□□□ 0.55
Ccl3P10855 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccl3P10855 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl3P10855 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl3P10855 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl3P10855 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl3P10855 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl3P10855 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
Ccl3P10855 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl3P10855 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ccl3P10855 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl3P10855 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccl3P10855 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccl3P10855 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccl3P10855 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms