Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NclP09405 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NclP09405 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NclP09405 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
NclP09405 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC30.9■■■□□ 2.54
NclP09405 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
NclP09405 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NclP09405 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
NclP09405 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC30.9■■■□□ 2.54
NclP09405 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NclP09405 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NclP09405 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NclP09405 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NclP09405 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
NclP09405 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
NclP09405 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NclP09405 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
NclP09405 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.53
NclP09405 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
NclP09405 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NclP09405 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
NclP09405 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
NclP09405 Gm17641-201ENSMUST00000166328 2350 ntBASIC30.88■■■□□ 2.53
NclP09405 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
NclP09405 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
NclP09405 Gm4430-201ENSMUST00000192413 1943 ntBASIC30.87■■■□□ 2.53
NclP09405 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
NclP09405 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
NclP09405 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
NclP09405 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
NclP09405 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
NclP09405 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NclP09405 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NclP09405 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
NclP09405 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NclP09405 Kdm3b-204ENSMUST00000224715 2032 ntBASIC30.85■■■□□ 2.53
NclP09405 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NclP09405 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
NclP09405 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NclP09405 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NclP09405 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
NclP09405 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
NclP09405 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC30.84■■■□□ 2.53
NclP09405 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
NclP09405 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
NclP09405 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
NclP09405 Gm27454-201ENSMUST00000185090 204 ntBASIC30.83■■■□□ 2.53
NclP09405 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
NclP09405 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
NclP09405 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NclP09405 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NclP09405 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC30.82■■■□□ 2.52
NclP09405 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC30.82■■■□□ 2.52
NclP09405 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NclP09405 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NclP09405 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NclP09405 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NclP09405 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NclP09405 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
NclP09405 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC30.81■■■□□ 2.52
NclP09405 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
NclP09405 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
NclP09405 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC30.8■■■□□ 2.52
NclP09405 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
NclP09405 Gm9207-201ENSMUST00000198773 1115 ntBASIC30.8■■■□□ 2.52
NclP09405 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC30.8■■■□□ 2.52
NclP09405 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NclP09405 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
NclP09405 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
NclP09405 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
NclP09405 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
NclP09405 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
NclP09405 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC30.79■■■□□ 2.52
NclP09405 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
NclP09405 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
NclP09405 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NclP09405 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NclP09405 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NclP09405 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NclP09405 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC30.78■■■□□ 2.52
NclP09405 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC30.78■■■□□ 2.52
NclP09405 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC30.77■■■□□ 2.52
NclP09405 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
NclP09405 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
NclP09405 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
NclP09405 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
NclP09405 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
NclP09405 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
NclP09405 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
NclP09405 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC30.77■■■□□ 2.52
NclP09405 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
NclP09405 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
NclP09405 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
NclP09405 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC30.75■■■□□ 2.51
NclP09405 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NclP09405 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
NclP09405 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NclP09405 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
NclP09405 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
NclP09405 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms