Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.82■□□□□ 0.92
Hoxb3P09026 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.82■□□□□ 0.92
Hoxb3P09026 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hoxb3P09026 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.82■□□□□ 0.92
Hoxb3P09026 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxb3P09026 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hoxb3P09026 Gm43017-201ENSMUST00000198296 752 ntBASIC20.81■□□□□ 0.92
Hoxb3P09026 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxb3P09026 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.8■□□□□ 0.92
Hoxb3P09026 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxb3P09026 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.8■□□□□ 0.92
Hoxb3P09026 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxb3P09026 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxb3P09026 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxb3P09026 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxb3P09026 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxb3P09026 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Hoxb3P09026 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.79■□□□□ 0.92
Hoxb3P09026 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.79■□□□□ 0.92
Hoxb3P09026 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxb3P09026 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxb3P09026 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxb3P09026 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Hoxb3P09026 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxb3P09026 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.78■□□□□ 0.92
Hoxb3P09026 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxb3P09026 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.78■□□□□ 0.92
Hoxb3P09026 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxb3P09026 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxb3P09026 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxb3P09026 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxb3P09026 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxb3P09026 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxb3P09026 Gm10849-201ENSMUST00000100397 618 ntBASIC20.77■□□□□ 0.92
Hoxb3P09026 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.77■□□□□ 0.92
Hoxb3P09026 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.77■□□□□ 0.92
Hoxb3P09026 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.77■□□□□ 0.92
Hoxb3P09026 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.77■□□□□ 0.92
Hoxb3P09026 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxb3P09026 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxb3P09026 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.77■□□□□ 0.92
Hoxb3P09026 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.77■□□□□ 0.92
Hoxb3P09026 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hoxb3P09026 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.76■□□□□ 0.91
Hoxb3P09026 Nespas-201ENSMUST00000143738 1083 ntBASIC20.76■□□□□ 0.91
Hoxb3P09026 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxb3P09026 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Hoxb3P09026 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxb3P09026 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxb3P09026 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.74■□□□□ 0.91
Hoxb3P09026 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxb3P09026 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxb3P09026 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxb3P09026 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.74■□□□□ 0.91
Hoxb3P09026 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxb3P09026 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.74■□□□□ 0.91
Hoxb3P09026 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.74■□□□□ 0.91
Hoxb3P09026 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxb3P09026 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.74■□□□□ 0.91
Hoxb3P09026 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.73■□□□□ 0.91
Hoxb3P09026 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.73■□□□□ 0.91
Hoxb3P09026 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxb3P09026 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxb3P09026 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxb3P09026 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Hoxb3P09026 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxb3P09026 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxb3P09026 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxb3P09026 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxb3P09026 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxb3P09026 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxb3P09026 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.72■□□□□ 0.91
Hoxb3P09026 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.72■□□□□ 0.91
Hoxb3P09026 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.72■□□□□ 0.91
Hoxb3P09026 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxb3P09026 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxb3P09026 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxb3P09026 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxb3P09026 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxb3P09026 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxb3P09026 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
Hoxb3P09026 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Hoxb3P09026 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxb3P09026 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxb3P09026 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.71■□□□□ 0.91
Hoxb3P09026 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxb3P09026 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxb3P09026 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hoxb3P09026 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxb3P09026 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxb3P09026 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxb3P09026 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Hoxb3P09026 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.7■□□□□ 0.9
Hoxb3P09026 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxb3P09026 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxb3P09026 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxb3P09026 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxb3P09026 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxb3P09026 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Hoxb3P09026 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms