Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm18284-201ENSMUST00000172604 624 ntBASIC19.86■□□□□ 0.77
Sod1P08228 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sod1P08228 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sod1P08228 Gm8495-201ENSMUST00000188740 694 ntBASIC19.86■□□□□ 0.77
Sod1P08228 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.86■□□□□ 0.77
Sod1P08228 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sod1P08228 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sod1P08228 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sod1P08228 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.85■□□□□ 0.77
Sod1P08228 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.85■□□□□ 0.77
Sod1P08228 Gm43017-201ENSMUST00000198296 752 ntBASIC19.85■□□□□ 0.77
Sod1P08228 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sod1P08228 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sod1P08228 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sod1P08228 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Sod1P08228 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sod1P08228 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sod1P08228 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sod1P08228 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Sod1P08228 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.84■□□□□ 0.77
Sod1P08228 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Sod1P08228 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.84■□□□□ 0.77
Sod1P08228 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sod1P08228 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sod1P08228 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sod1P08228 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sod1P08228 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sod1P08228 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sod1P08228 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.83■□□□□ 0.77
Sod1P08228 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.83■□□□□ 0.77
Sod1P08228 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sod1P08228 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sod1P08228 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sod1P08228 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sod1P08228 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Sod1P08228 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Sod1P08228 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sod1P08228 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sod1P08228 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sod1P08228 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sod1P08228 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.82■□□□□ 0.76
Sod1P08228 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sod1P08228 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.82■□□□□ 0.76
Sod1P08228 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sod1P08228 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sod1P08228 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sod1P08228 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.82■□□□□ 0.76
Sod1P08228 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sod1P08228 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sod1P08228 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sod1P08228 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sod1P08228 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sod1P08228 Gm8493-201ENSMUST00000196881 489 ntBASIC19.81■□□□□ 0.76
Sod1P08228 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.81■□□□□ 0.76
Sod1P08228 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sod1P08228 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sod1P08228 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Sod1P08228 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Sod1P08228 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sod1P08228 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sod1P08228 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.8■□□□□ 0.76
Sod1P08228 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.8■□□□□ 0.76
Sod1P08228 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.8■□□□□ 0.76
Sod1P08228 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sod1P08228 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sod1P08228 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sod1P08228 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sod1P08228 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.79■□□□□ 0.76
Sod1P08228 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sod1P08228 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sod1P08228 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
Sod1P08228 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sod1P08228 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sod1P08228 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Sod1P08228 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sod1P08228 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sod1P08228 Gm43173-201ENSMUST00000202246 593 ntBASIC19.78■□□□□ 0.76
Sod1P08228 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sod1P08228 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sod1P08228 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sod1P08228 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sod1P08228 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sod1P08228 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sod1P08228 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sod1P08228 Gm12251-201ENSMUST00000117893 792 ntBASIC19.77■□□□□ 0.76
Sod1P08228 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sod1P08228 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sod1P08228 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sod1P08228 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.77■□□□□ 0.76
Sod1P08228 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sod1P08228 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sod1P08228 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sod1P08228 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sod1P08228 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sod1P08228 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sod1P08228 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.75■□□□□ 0.75
Sod1P08228 Gm43530-201ENSMUST00000195920 274 ntBASIC19.75■□□□□ 0.75
Sod1P08228 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.75■□□□□ 0.75
Sod1P08228 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sod1P08228 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms