Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CfdP03953 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CfdP03953 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CfdP03953 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CfdP03953 Gm8503-201ENSMUST00000118131 455 ntBASIC17.39■□□□□ 0.37
CfdP03953 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CfdP03953 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.39■□□□□ 0.37
CfdP03953 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CfdP03953 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CfdP03953 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CfdP03953 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CfdP03953 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CfdP03953 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.39■□□□□ 0.37
CfdP03953 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.39■□□□□ 0.37
CfdP03953 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.39■□□□□ 0.37
CfdP03953 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CfdP03953 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CfdP03953 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CfdP03953 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CfdP03953 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CfdP03953 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CfdP03953 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CfdP03953 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.37■□□□□ 0.37
CfdP03953 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CfdP03953 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CfdP03953 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.37■□□□□ 0.37
CfdP03953 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.37■□□□□ 0.37
CfdP03953 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CfdP03953 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CfdP03953 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CfdP03953 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CfdP03953 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CfdP03953 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CfdP03953 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CfdP03953 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CfdP03953 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CfdP03953 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CfdP03953 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CfdP03953 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CfdP03953 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.35■□□□□ 0.37
CfdP03953 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.35■□□□□ 0.37
CfdP03953 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CfdP03953 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CfdP03953 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CfdP03953 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CfdP03953 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CfdP03953 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.34■□□□□ 0.37
CfdP03953 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.34■□□□□ 0.37
CfdP03953 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CfdP03953 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CfdP03953 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CfdP03953 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CfdP03953 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CfdP03953 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CfdP03953 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CfdP03953 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CfdP03953 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CfdP03953 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CfdP03953 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CfdP03953 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CfdP03953 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CfdP03953 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.32■□□□□ 0.36
CfdP03953 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.32■□□□□ 0.36
CfdP03953 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CfdP03953 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CfdP03953 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CfdP03953 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CfdP03953 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CfdP03953 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CfdP03953 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CfdP03953 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.31■□□□□ 0.36
CfdP03953 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CfdP03953 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CfdP03953 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CfdP03953 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CfdP03953 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CfdP03953 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms