Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NgfP01139 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NgfP01139 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.54■□□□□ 0.56
NgfP01139 Mir7075-201ENSMUST00000184187 82 ntBASIC18.54■□□□□ 0.56
NgfP01139 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.54■□□□□ 0.56
NgfP01139 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.54■□□□□ 0.56
NgfP01139 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NgfP01139 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.54■□□□□ 0.56
NgfP01139 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NgfP01139 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
NgfP01139 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NgfP01139 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NgfP01139 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NgfP01139 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NgfP01139 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.53■□□□□ 0.56
NgfP01139 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.53■□□□□ 0.56
NgfP01139 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NgfP01139 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.53■□□□□ 0.56
NgfP01139 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NgfP01139 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NgfP01139 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NgfP01139 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NgfP01139 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NgfP01139 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NgfP01139 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.53■□□□□ 0.56
NgfP01139 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.53■□□□□ 0.56
NgfP01139 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NgfP01139 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NgfP01139 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NgfP01139 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NgfP01139 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NgfP01139 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NgfP01139 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NgfP01139 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NgfP01139 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NgfP01139 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NgfP01139 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NgfP01139 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NgfP01139 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NgfP01139 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NgfP01139 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NgfP01139 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NgfP01139 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NgfP01139 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NgfP01139 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
NgfP01139 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.5■□□□□ 0.55
NgfP01139 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NgfP01139 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NgfP01139 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.5■□□□□ 0.55
NgfP01139 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NgfP01139 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NgfP01139 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.49■□□□□ 0.55
NgfP01139 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NgfP01139 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NgfP01139 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NgfP01139 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NgfP01139 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
NgfP01139 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.49■□□□□ 0.55
NgfP01139 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.49■□□□□ 0.55
NgfP01139 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NgfP01139 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NgfP01139 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NgfP01139 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NgfP01139 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NgfP01139 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NgfP01139 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NgfP01139 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NgfP01139 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NgfP01139 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NgfP01139 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
NgfP01139 Gm8495-201ENSMUST00000188740 694 ntBASIC18.47■□□□□ 0.55
NgfP01139 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.47■□□□□ 0.55
NgfP01139 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.47■□□□□ 0.55
NgfP01139 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NgfP01139 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NgfP01139 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
NgfP01139 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NgfP01139 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NgfP01139 Gm18284-201ENSMUST00000172604 624 ntBASIC18.46■□□□□ 0.55
NgfP01139 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NgfP01139 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NgfP01139 Gm8493-201ENSMUST00000196881 489 ntBASIC18.46■□□□□ 0.55
NgfP01139 Gm43017-201ENSMUST00000198296 752 ntBASIC18.46■□□□□ 0.55
NgfP01139 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NgfP01139 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NgfP01139 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NgfP01139 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NgfP01139 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NgfP01139 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NgfP01139 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NgfP01139 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NgfP01139 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NgfP01139 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NgfP01139 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NgfP01139 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NgfP01139 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.45■□□□□ 0.54
NgfP01139 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NgfP01139 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.45■□□□□ 0.54
NgfP01139 Gm43530-201ENSMUST00000195920 274 ntBASIC18.45■□□□□ 0.54
NgfP01139 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms